Paucibacter sp. KCTC 42545: AT984_05010
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Entry
AT984_05010 CDS
T04227
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pkt
Paucibacter sp. KCTC 42545
Pathway
pkt03030
DNA replication
pkt03430
Mismatch repair
pkt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AT984_05010
03430 Mismatch repair
AT984_05010
03440 Homologous recombination
AT984_05010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkt03032
]
AT984_05010
03400 DNA repair and recombination proteins [BR:
pkt03400
]
AT984_05010
Enzymes [BR:
pkt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AT984_05010
DNA replication proteins [BR:
pkt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AT984_05010
DNA repair and recombination proteins [BR:
pkt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AT984_05010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_18
AAA_14
DUF3646
AAA_16
Rad17
AAA_30
TsaE
PIF1
AAA_2
nSTAND3
SKI
Herpes_Helicase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ALT76644
UniProt:
A0A0U3DKB7
LinkDB
All DBs
Position
1129318..1131582
Genome browser
AA seq
754 aa
AA seq
DB search
MSYQVLARKYRPHSFEELVGQEHVVQALANALTQQRLHHAYLFTGTRGVGKTTVSRILAK
SLNCTGPDGQGGITATPCGVCDACRDIDAGRFVDYVELDAASNRGVEEISQLLDQSVYKP
VMGRFKVYMIDEVHMLSNTAFNAMLKTLEEPPDYLKFVLATTDPQKVPVTVLSRCLQFNL
RPMAPQTVLSHLTQVLQAEHVAADAGSLRLISRAARGSMRDALSLTDQAIAFGAGSLVEE
GVRQMLGTVDRGHVVAILDALIAADGAAVVAQADGLRSLGLSAAGMLEDLAGLLQQMAVA
QAAPGALIESDPDTAEAMRLSAMLPADEIQLMYSMALHGRQELALAPDEYAGMLMVLLRM
LSFRPAGGSGSSSGGGQALVKPAARPVARSIAASAVATTAAPAASFASNSAAVVHAAAPR
ADASAQPVQMAPMQAAATSATAPAAASPEAEPEPEPEPASAPEPSPEPASAAALPPVAMA
AGLQAAEPAAPPFVASAAPVASIAPVAPAAVSAPEQPPAPAPAAPAFRARAPEADASHSA
RLRPRPVVHKPEPEPEDDVPPWLDAAPAADDEGGGSRPYGPSDLNDGGEAQAEGEDWSPS
DRVRPSSAERNAYLSTAGADVPLRPTALGERWAELIRPLGLTALTRELAVRSECVGFEQQ
GEIQIWRLRVERESLRQPALRDKLQAALEAGLQQSVQIEMEAGQAHDSPALRDAAAAQAK
QRAVEQIVIKDPLAQQLLAQFKTARIVPGSIKAH
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgagttaccaggttctcgcgcgaaagtaccgtccccacagctttgaagagttggtgggt
caggagcatgtggtgcaggccttggccaatgcattgacgcagcagcgtctgcatcacgcc
tatctgttcaccggcacgcggggcgtgggcaagaccacggtctcgcgcatccttgccaag
agcctcaattgcaccgggccggatggtcagggcggcatcaccgccacgccttgcggcgtc
tgcgatgcctgccgcgacatcgatgccggccgttttgtggattatgttgagctggacgcg
gcctccaatcgcggcgtcgaggagatctcgcagctgctggatcagtcggtctacaagccg
gtgatgggccgtttcaaggtctacatgatcgacgaagtccacatgctctcgaacaccgcc
ttcaacgccatgttgaagacgctggaggagccgccggactatctgaaattcgtgctcgcc
accaccgacccgcaaaaagtgccggtcaccgtgttgtcgcgctgcttgcagttcaatctg
cggccgatggcgccgcagacggtgctgagccatctcacacaggtcttgcaggccgagcat
gtggcggccgatgcgggctcgctgcgcttgatctcccgcgctgcacgcggttcgatgcgc
gatgcgctgtcgctgaccgaccaggcgattgcttttggcgccggcagcctggtggaagag
ggcgtgcgccagatgttgggcacggtggatcgtggccatgtggtggcgattctggacgcc
ttgattgcggctgacggcgccgccgtagtggcgcaggccgatggtctgcgcagcctgggt
ttgtctgcggctggcatgctggaggatttggcgggcttgttgcagcaaatggctgtggcc
caagccgcgcctggcgccttgatcgaatccgaccccgataccgccgaagccatgcgtctg
tccgccatgctgccggccgatgaaattcagctgatgtacagcatggccttgcatggccgc
caagagctggccctggcgccggacgaatatgccggcatgctgatggtcttgctgcgcatg
ctcagcttccgccctgcgggaggttcgggttcttctagtggaggcggacaagcgctcgtg
aagcctgctgcgcgtcccgtggcccggtcgattgcggcatcagctgttgcgacaacggct
gcgcccgcggcgtcgtttgctagcaattcagcggccgttgtccatgccgctgcgccacgc
gctgacgcatcggcgcaacctgtgcagatggcgccgatgcaagcagccgcgacgtccgcg
acagcccctgccgccgcgtcgccagaggctgaaccagaacccgaaccagagcctgcttca
gccccggagccttcgcctgaacccgcatctgcagcggcactgccgccggtagcgatggcg
gccggcttgcaagcggctgagccggctgcgccgccgttcgttgcctcggcagcacctgtt
gcgtctattgcgcctgtagctcctgctgcggtgtcggcgcccgagcaacccccggctccg
gccccagctgcgcccgcctttcgcgcccgcgcgcccgaggcggacgccagccacagcgca
cgcctgcgtccgcgcccggtggtgcacaagcccgagcctgagcccgaggatgatgtgccg
ccctggttggatgccgcgccggccgccgacgatgaaggcggcggaagccggccctacggc
ccatcggatttgaatgatggcggtgaagcgcaggcagaaggcgaagactggtcgcccagc
gatcgtgtccgtccttcgtcggccgagcgcaatgcttacctctcaaccgcaggcgcagac
gtgcccttgcggcccacggcgctgggcgagcgctgggctgagctgatccgcccgctgggc
ttgaccgccctcacgcgtgaactggccgtgcgctcggagtgcgtgggtttcgagcagcag
ggtgaaattcagatctggcgcctgcgtgtcgagcgagaatcgctgcgccagcccgcgctg
cgcgacaagctgcaagccgcgctggaagccggtctgcagcaaagcgtgcaaatcgagatg
gaggccggccaggcccatgattcgcccgccctgcgcgatgcggccgccgcccaggccaag
cagcgtgcggtggagcaaatcgtcatcaaagacccgctggcccagcagttgctggctcag
ttcaagaccgcacgcatcgtgccgggctcaatcaaggcgcactga
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