Paucibacter sp. KCTC 42545: AT984_05625
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Entry
AT984_05625 CDS
T04227
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pkt
Paucibacter sp. KCTC 42545
Brite
KEGG Orthology (KO) [BR:
pkt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkt03032
]
AT984_05625
03036 Chromosome and associated proteins [BR:
pkt03036
]
AT984_05625
03400 DNA repair and recombination proteins [BR:
pkt03400
]
AT984_05625
DNA replication proteins [BR:
pkt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AT984_05625
Chromosome and associated proteins [BR:
pkt03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AT984_05625
DNA repair and recombination proteins [BR:
pkt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AT984_05625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ALT76739
UniProt:
A0A0U2UIN9
LinkDB
All DBs
Position
complement(1277304..1277609)
Genome browser
AA seq
101 aa
AA seq
DB search
MTRSDLVALLSDRFGQLAQRDTEFAVKTILDAMSDALARGHRIEIRGFGSFTVNRRPPRK
GRNPRSGEQVLIPEKLVPHFKPGKALREGVDAKSSLEASAP
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgactcgttccgacctggttgctctgctgtcagaccgctttggccaactggcccagcgc
gacaccgaatttgccgtcaagacgattctggacgccatgtccgacgccctggcgcgcggc
caccgcatcgaaattcgcggctttggcagcttcaccgtcaaccgccgcccgccacgcaag
ggccgcaacccacgcagcggcgagcaggtcttgatccctgaaaaactggttcctcacttc
aagcccggcaaagccttgcgagaaggcgtggacgccaaaagctcgctcgaagccagcgcg
ccttaa
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