Paucibacter sp. KCTC 42545: AT984_05660
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Entry
AT984_05660 CDS
T04227
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pkt
Paucibacter sp. KCTC 42545
Brite
KEGG Orthology (KO) [BR:
pkt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkt03032
]
AT984_05660
03400 DNA repair and recombination proteins [BR:
pkt03400
]
AT984_05660
Enzymes [BR:
pkt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AT984_05660
DNA replication proteins [BR:
pkt03032
]
Prokaryotic type
DNA Topoisomerases
AT984_05660
DNA repair and recombination proteins [BR:
pkt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AT984_05660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
ALT79663
UniProt:
A0A0U3DPZ4
LinkDB
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Position
complement(1285797..1288475)
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AA seq
892 aa
AA seq
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MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN
RAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDNAAAM
RYTEIRLAKIAHEMLADIDKETVNFGPNYDGSEKEPLVLPARLPNLLINGATGIAVGMAT
NIPPHNLNEVVDACLHSLKNPDCTVDELMEIIPAPDFPTAGIIYGLSGARDGYRTGRGKV
VMRAKVHFEDIDRGNRQAIIVDEIPYQVNKKTLLERIAELVHEKKIEGISHIQDESDKSG
MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALIDGQPKLCNLKDLITVFLEHRRE
VVTRRTIFELRKARDRGHVLEGLAVAMANIDEFIATIKNSPTPPVAKAALMAKSWDSSLV
REMLVRAEGDTPGGRNAFRPEGLEPVFGMQSDGLYRLSDDQASEILQMRLQRLTGLEQDK
IVSEYKEVMSQIADLLDILAKPARVTAIIGEELVQVRQEFGQTKIGARRSAIEHNAQELG
TEDLITPTDMVVTLSHTGYIKSQALSEYRAQKRGGRGKQATQTKDDDWVDQLFIANTHDW
ILCFSNRGRVYWLKVWEVPQGSRNSRGKPIVNMFPLQQDEKITVVLPLTGEFRSFPEGHF
IFMATALGTVKKTSLEDFSNPRKAGIISIALDEGDHLIGAALTDGKHDVMLFSDGGKAVR
FDEDDVRPLGRTARGVRGMMLEPEQRLIAMLVAEDETQSVLTATENGYGKRTSITEYTRH
GRGTKGMIAIQQTERNGRVVAATLVRAEDEIMLITDRGVLVRTRVSEIRELGRATQGVTL
IALDDGSKLSGLQRIVENDANEGNAAEASDAADASNEPANPTDDAGDDTTKE
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgacccagttcgccaaggaaacattgcccatcagcctcgaagaggaaatgcggcgctca
tacctcgactacgccatgagcgtgatcgttggccgtgcactccccgatgctcgcgacggc
ttgaagccggtgcaccgccgcgttttgttcgcgatgcacgagttgaacaacgattggaat
cgggcgtataaaaaatcggctcgtatcgttggcgacgtgattggtaaatatcacccacac
ggggataccgccgtctacgacaccatcgtgcgtatggcgcaggatttttctctgcgccat
atgttggtcgatggccagggcaatttcggttcggtggacggcgataacgctgcggccatg
cgatataccgaaatccgcttggccaaaatcgcccacgaaatgctggccgatattgacaag
gaaaccgtcaatttcggacccaactacgacggctcggaaaaagagccgctggtcttgcca
gcccgcctgcccaacttactgatcaacggcgccaccggcattgccgtgggcatggccacc
aacatcccgccgcacaacctcaacgaggtggtggatgcttgcctgcactcgctgaagaac
ccggattgcaccgtcgatgagttgatggaaatcatcccggcgcctgacttcccgaccgcc
ggcatcatctatggcctgtccggtgcccgcgacggctaccgcaccggccgcggcaaggtg
gtgatgcgcgccaaggtccacttcgaggacatcgaccgcggcaaccgccaagccatcatc
gttgacgagattccgtatcaagttaacaagaaaaccctgctcgagcgcatcgccgagttg
gtgcacgaaaagaagatcgaaggcatcagccacatccaggacgagagcgacaagtccggc
atgcgcgtggtgatcgaattgaagcgcggtgaagtgcccgaagtggtgctgaacaatctg
tacaaacagacgcagctgcaagacaccttcggcatgaatatggtggcgctgatcgacggt
cagcccaagctgtgcaacctgaaagacctgatcacggtcttcctggagcaccgccgtgaa
gtggtgacgcgccggacgattttcgagttgcgcaaggcgcgcgatcgcggccatgtgctg
gaaggcctggccgtggccatggccaatatcgacgagttcatcgccaccatcaagaactcg
cccacgccgcccgtggccaaggccgccttgatggccaagagctgggattcctcgctggtg
cgcgagatgctggtgcgcgccgaaggcgacacgcctggcggccgcaatgccttccgcccc
gaagggctggagccggtgttcggcatgcagtccgacggcctctaccgcttgtcggacgac
caagccagcgaaatcctgcagatgcgcttgcagcgcttgaccggccttgagcaggacaag
atcgtcagcgagtacaaggaagtgatgtcgcagatcgccgacttgctggacatcctggcc
aagcccgcccgcgtcaccgccatcattggcgaagaattggtgcaagtgcgccaggaattc
ggccaaaccaagataggcgcacgccgcagcgcgattgaacataacgcccaggaactgggc
accgaagacctgatcacgcccaccgatatggtggtgacgctctcgcacaccggctacatc
aagagccaggcgctgagcgaataccgcgcgcaaaaacgcggcggccgcggcaagcaagcc
acccagaccaaggacgacgactgggtcgaccaactcttcatcgccaacacccacgactgg
attctgtgcttcagcaatcgtggccgcgtctactggctgaaggtgtgggaagtgccgcag
ggttcgcgcaattcgcgcggcaagcccatcgtcaatatgttcccgctgcagcaagacgag
aagatcaccgtcgtgctgcctttgaccggtgagttccgcagcttccccgaaggtcacttc
atcttcatggccactgccctcggcacggtcaagaagacctcgctggaagacttctccaac
ccccgcaaggccggcatcatctcgatcgcactggacgaaggcgaccacctgattggtgcc
gcgctgaccgacggcaagcatgacgtgatgctgttcagcgatggcggcaaggccgtgcgc
tttgacgaagacgatgtgcgtccgctgggccgcaccgcccgcggcgtgcgcggcatgatg
ctcgagcccgagcagcgcctgatcgccatgctggtggccgaggacgaaacgcagagcgtg
ctgaccgccaccgaaaacggctacggcaagcgcacctccatcaccgagtacacccgccac
ggccgcggcaccaagggcatgatcgccatccagcaaaccgagcgcaacggtcgcgtggtg
gccgccaccctggtgcgcgcagaagacgaaatcatgctgatcaccgaccgcggcgtgctg
gtgcgcacccgtgtttcggaaatccgtgaactgggccgcgccacgcaaggcgtcaccctg
atcgcgctggatgatggctccaagctctcgggcttgcagcgcatcgtcgagaacgacgcc
aacgaaggcaatgccgctgaagccagcgacgctgctgacgcctccaacgaaccagccaac
ccgaccgacgacgctggcgacgacaccaccaaggaataa
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