Paucibacter sp. KCTC 42545: AT984_06465
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Entry
AT984_06465 CDS
T04227
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pkt
Paucibacter sp. KCTC 42545
Pathway
pkt03030
DNA replication
pkt03430
Mismatch repair
pkt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AT984_06465
03430 Mismatch repair
AT984_06465
03440 Homologous recombination
AT984_06465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkt03032
]
AT984_06465
03400 DNA repair and recombination proteins [BR:
pkt03400
]
AT984_06465
Enzymes [BR:
pkt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AT984_06465
DNA replication proteins [BR:
pkt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AT984_06465
DNA repair and recombination proteins [BR:
pkt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AT984_06465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ALT76888
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All DBs
Position
1460590..1461312
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AA seq
240 aa
AA seq
DB search
MRQIFFDTETTGLLAEGGDRVIEIGCVEMINRQLTGNNLHIYINPQRASHEDALRVHGLT
EAFLSDKPLFAQIAPELLTFLADAELVIHNAPFDIGFINAELKRLKLGPITDVVGSVRDT
LLMAREMFPGKANSLDALCRRLEVDNSNRKLHGALLDAELLAEVYIRLTRGQDSLVMDDA
GEGSGEDGEYRVAAVDLSSFSLPVLSASDEELQAHEKVLLELDKASGGKRVWKSADVISA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaaatcttcttcgacaccgaaaccaccggcctgctggccgagggcggtgaccgc
gtcattgaaatcggctgcgttgagatgatcaaccgtcagctgaccggtaacaacctgcac
atctacatcaacccgcaacgcgccagccatgaggacgccttgcgtgttcacggcctgacc
gaggcgtttttgtccgacaagccactgttcgcgcagatcgcacccgaactgctgacgttc
ttggccgacgcggaactggtgattcacaacgcgcccttcgacattggctttatcaatgcg
gagttgaagcgtctcaagctgggccccatcaccgatgtggtgggcagcgtgcgcgacacc
ttgctgatggcgcgcgagatgttccccggcaaggccaattcgctggacgccctgtgccgc
cgcctggaagtggacaactccaaccgcaagctgcacggcgctttgctggacgcggaattg
ctggccgaggtctacatccgcctgacccgcgggcaagactcgctggtgatggacgatgcg
ggcgagggcagtggcgaagacggcgaataccgtgtggctgccgtggacctcagcagcttc
tctttgccggtgttgtcggccagcgatgaggagttgcaagcgcacgagaaagtgctgctg
gagctggacaaagccagcggcggaaaacgggtctggaagagtgcagacgtaatttctgca
tga
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