KEGG   Paucibacter sp. KCTC 42545: AT984_06605
Entry
AT984_06605       CDS       T04227                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
pkt  Paucibacter sp. KCTC 42545
Brite
KEGG Orthology (KO) [BR:pkt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pkt03032]
    AT984_06605
   03036 Chromosome and associated proteins [BR:pkt03036]
    AT984_06605
   03400 DNA repair and recombination proteins [BR:pkt03400]
    AT984_06605
DNA replication proteins [BR:pkt03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    AT984_06605
Chromosome and associated proteins [BR:pkt03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    AT984_06605
DNA repair and recombination proteins [BR:pkt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      AT984_06605
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 UBA_HYPK HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: ALT76908
UniProt: A0A0U3D9W9
LinkDB
Position
1489101..1489373
AA seq 90 aa
MNKSELIDHIATQADISKAAAARALEAVIVGVKTTLKKNGTVSLVGFGTFSVTKRAARAG
RNPRTGDAIKIKSAKVPKFRPGKALKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaataagtctgaactgatcgatcacattgccacgcaagcggatatttccaaggctgcg
gcggcgcgggctttggaagcagtgatagtcggtgtcaagaccacgttgaagaagaacggc
acggtgtcgctggtgggtttcggtacgttcagcgtcaccaagcgcgctgcgcgtgcgggc
cgcaacccacgcacgggggatgccatcaaaatcaagtccgccaaggtgccaaaattccgt
cctggcaaggctttgaaagatgcggtcaattaa

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