Paucibacter sp. KCTC 42545: AT984_06605
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Entry
AT984_06605 CDS
T04227
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
pkt
Paucibacter sp. KCTC 42545
Brite
KEGG Orthology (KO) [BR:
pkt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkt03032
]
AT984_06605
03036 Chromosome and associated proteins [BR:
pkt03036
]
AT984_06605
03400 DNA repair and recombination proteins [BR:
pkt03400
]
AT984_06605
DNA replication proteins [BR:
pkt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AT984_06605
Chromosome and associated proteins [BR:
pkt03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AT984_06605
DNA repair and recombination proteins [BR:
pkt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AT984_06605
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
UBA_HYPK
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ALT76908
UniProt:
A0A0U3D9W9
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All DBs
Position
1489101..1489373
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AA seq
90 aa
AA seq
DB search
MNKSELIDHIATQADISKAAAARALEAVIVGVKTTLKKNGTVSLVGFGTFSVTKRAARAG
RNPRTGDAIKIKSAKVPKFRPGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagtctgaactgatcgatcacattgccacgcaagcggatatttccaaggctgcg
gcggcgcgggctttggaagcagtgatagtcggtgtcaagaccacgttgaagaagaacggc
acggtgtcgctggtgggtttcggtacgttcagcgtcaccaagcgcgctgcgcgtgcgggc
cgcaacccacgcacgggggatgccatcaaaatcaagtccgccaaggtgccaaaattccgt
cctggcaaggctttgaaagatgcggtcaattaa
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