Paucibacter sp. KCTC 42545: AT984_06880
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Entry
AT984_06880 CDS
T04227
Name
(GenBank) hypothetical protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pkt
Paucibacter sp. KCTC 42545
Pathway
pkt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pkt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AT984_06880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkt03000
]
AT984_06880
03400 DNA repair and recombination proteins [BR:
pkt03400
]
AT984_06880
Enzymes [BR:
pkt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AT984_06880
Transcription factors [BR:
pkt03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AT984_06880
DNA repair and recombination proteins [BR:
pkt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AT984_06880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ALT76953
LinkDB
All DBs
Position
1546177..1547154
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AA seq
325 aa
AA seq
DB search
MTALNPFDAAILLPYQAPYHVEALLQFLADRAIASIEQVDQAQLRITRSVQGLSAQGQAF
EGWLSLQFQPERSVVALSFSAALRAQPTIIDSLLPMLRRWLDLDANPQALIDGLGPLAAS
HPGLRLPGCLDRFELAVRAVLGQQITVAAARTLAQRFVQAFGRPLNEPGPPGLTAPLRLF
PRVSDVAELEAGQIAELGIIRRRADCLLSLARSWDQLAYAQQAWQPAQDADAQPEEQAAQ
LKHALLELQGISGIGPWTAHYMLMRGWSWADAFPPKDVVLLRQLSQGLPEPLSPGAYAQR
AEAFRPYRSYAVLHLWRAATLQAKR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgactgccctgaatcccttcgacgcggcaattcttctgccctatcaagcgccttatcac
gtcgaggccttgctgcagtttctggctgatcgcgccattgccagcattgagcaggtcgat
caggcgcagttgcgcattacgcgcagcgtgcaagggctgagcgcgcaggggcaggccttt
gaaggctggctgagcctgcagtttcagcccgagcgttccgtcgtggcgctgagcttttct
gcggctctgcgggcccagccgacgatcatcgatagcctgctgcccatgctgcgccgctgg
ctggacctggacgccaatccgcaagccctcatagatgggctggggcccttggcagctagc
catcctggcctgcgcctgccgggttgcctggaccgctttgagctggccgtgcgcgccgtg
ctggggcagcaaatcacggtggcagcagcgcgcaccctggcgcagcgttttgtgcaggcc
ttcgggcggccgctgaacgagccagggccgccaggtttgacggcgcctttgcgtctgttc
ccccgggtcagcgatgtggctgagctggaggctggtcagatcgctgagctgggcatcatc
cggcgccgcgccgattgcctgctgagcctggcgcgcagctgggatcagctggcctatgcc
cagcaagcctggcagccagcgcaggatgctgatgcccagccagaagaacaagccgctcag
ctcaagcacgcgctgctggaactgcaaggcatcagcggcatcgggccctggacggcgcat
tacatgctgatgcgtggctggtcatgggcggatgcctttccgcccaaggacgtggtgctg
ctgcgccaactgagccagggcttgcctgaaccactgagcccgggcgcctatgcccagcgg
gcggaagcctttcgcccctatcgcagctacgcggtgctgcatctgtggcgggcggcaacg
ctgcaagcaaagcgctag
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integrated database retrieval system
