Paucibacter sp. KCTC 42545: AT984_07635
Help
Entry
AT984_07635 CDS
T04227
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pkt
Paucibacter sp. KCTC 42545
Pathway
pkt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pkt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AT984_07635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkt03019
]
AT984_07635
03016 Transfer RNA biogenesis [BR:
pkt03016
]
AT984_07635
Enzymes [BR:
pkt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AT984_07635
Messenger RNA biogenesis [BR:
pkt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AT984_07635
Transfer RNA biogenesis [BR:
pkt03016
]
Prokaryotic type
tRNA degradation factors
AT984_07635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KH_KhpA-B
S1_RRP5
OB_RRP5_4th
DUF5813
KH-I_KHDC4-BBP
DNA_pol3_a_NI
Motif
Other DBs
NCBI-ProteinID:
ALT77081
UniProt:
A0A0U3EEQ0
LinkDB
All DBs
Position
1700990..1703128
Genome browser
AA seq
712 aa
AA seq
DB search
MGLFNKVTKSFQWGNHAVTMETGEIARQSSGAVVVDIEGTVVLATVVAKTEAKAGQDFFP
LTVDYLEKTYAAGKIPGSFFKREGRPSELETLTSRLIDRPIRPLFPEGFYNEVQVVVHVL
SLNPEVQADIAALIASSAALAVSGIPFNGPIGAARVGYVNGEYILNPGKTELINSKMDLV
VAGTQAAVLMVESEADGLSEEIMLGAVVFGHEQGNVAIAAINELVRDAGKPSWNWTAPAK
NEPLIAKVGALADEALVAAYQIRNKQARTQACRAVTANVFAGLKADGIEFDKVEVESLLF
EIEARIVRGQILAGEPRIDGRDTRTVRPIEIRNSLLPRTHGSALFTRGETQALVVATLGT
DRDAQRIDALAGEFEDRFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALIAALPNK
EDFPYTMRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLIKDGNRFAVL
TDILGDEDHLGDMDFKVAGTTGGITALQMDIKIQGITKEIMQVALAQAKEARLHILGKMV
EAMGTANTEVSQFAPRLYTMKINPEKIRDVIGKGGATIRALTEETGTTIDIGEDGTITIA
STDADKAEHAKKCIEEITAEVEIGKVYEGPITKILDFGALVNLLPGKDGLLHISQIAHQR
VEKVTDFLKEGQIVKVKVMETDEKGRIKLSMKALIDRDAAPVAPAADAEAQQ
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgttcaataaagtcaccaagagcttccagtggggcaaccacgccgtcaccatg
gaaaccggcgaaatcgcccgtcagtccagcggcgccgtcgtcgttgatatcgaaggcacc
gtcgttctggccactgtggtcgccaagaccgaagccaaggccggccaggatttcttcccg
ctgaccgttgactatctggaaaagacctacgccgccggcaagatccctggcagcttcttc
aagcgtgaaggccgccccagcgagttggagaccctgaccagccgcctgatcgaccgcccg
atccgcccgctgttcccggaaggcttctacaacgaagttcaggtcgtcgtgcacgttctg
tccttgaatcctgaggtgcaagccgacatcgccgccttgatcgcgtcgagcgccgcgctg
gccgtgtctggcattcctttcaatggccccatcggcgctgcgcgcgtgggctatgtgaat
ggcgagtacatcctcaaccccggcaagaccgagctgatcaacagcaagatggacctggtt
gtggcgggtacgcaagccgccgtgctgatggtggaatccgaggccgatggcctgtcggaa
gaaatcatgttgggcgctgtggtcttcggtcatgagcaaggcaatgtggccatcgccgcc
atcaacgagttggtgcgcgacgctggcaagccgagctggaactggactgcgcctgccaag
aacgagccgctgatcgccaaggttggcgctctggccgatgaagccctggttgctgcctat
caaatccgcaacaagcaagctcgcactcaggcttgccgcgccgtcacggccaatgtgttc
gccggcctgaaggctgatggcattgagttcgacaaggtcgaggtggaaagcctgctgttc
gagatcgaagcccgcatcgtgcgtggtcagatcctggccggcgagccccgcattgacggc
cgcgacacccgcaccgtgcgcccgatcgaaatccgcaacagcctgctgccccgcacgcac
ggctcggccctgttcacccgtggcgaaacgcaagctctggtcgttgcgactttgggcacc
gaccgtgacgcacagcgcatcgacgcgctggctggcgagttcgaagaccgcttcatgctg
cactacaacatgcctcctttcgccaccggcgaaaccggccgcgtgggcagcccgaagcgc
cgcgaaatcggccacggccgtctggccaagcgcgcgctgatcgccgcgctgccgaacaag
gaagacttcccctacaccatgcgtgtggtgtcggagatcaccgagtccaatggctcctcg
tcgatggcttcggtctgcggcggctgcctggctttgatggacgctggtgtgccgatgaag
gctcacgtggccggtatcgccatgggcttgatcaaggacggcaaccgtttcgccgtgctg
accgacatcctgggtgacgaagatcacctgggcgacatggacttcaaggtggctggcacg
accggtggtatcactgctctgcagatggacatcaagatccagggcatcaccaaggaaatc
atgcaggtcgctttggcgcaagccaaagaagcccgtctgcacatcctgggcaagatggtg
gaagccatgggcacggccaataccgaggtgtcgcaattcgcgccgcgtctgtacaccatg
aagatcaaccccgagaagatccgtgacgtgatcggcaagggcggcgccaccatccgtgcg
ctgaccgaagaaaccggcaccaccatcgacatcggcgaagacggcaccatcaccatcgct
tcgaccgatgctgacaaggctgagcacgccaagaagtgcatcgaagagatcaccgctgaa
gtcgaaatcggcaaggtctacgaaggcccgatcaccaagatcttggacttcggtgcactc
gtgaatctgctgcctggcaaggacggtctgctgcacatcagccagatcgctcaccagcgc
gtcgagaaggtgaccgacttcctcaaggaaggccagatcgtcaaggtcaaggtcatggaa
accgacgagaagggtcgcatcaagctgtcgatgaaggccttgatcgaccgtgacgcggcg
cctgtcgcacctgctgctgacgcagaagctcagcagtaa
DBGET
integrated database retrieval system
