Paucibacter sp. KCTC 42545: AT984_08620
Help
Entry
AT984_08620 CDS
T04227
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pkt
Paucibacter sp. KCTC 42545
Brite
KEGG Orthology (KO) [BR:
pkt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pkt03016
]
AT984_08620 (truB)
Enzymes [BR:
pkt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AT984_08620 (truB)
Transfer RNA biogenesis [BR:
pkt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AT984_08620 (truB)
Prokaryotic type
AT984_08620 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ALT77244
UniProt:
A0A0U3DAS7
LinkDB
All DBs
Position
complement(1941763..1942710)
Genome browser
AA seq
315 aa
AA seq
DB search
MSAARPPRIKTVRRPIHGVLLLDKPLGWTSNDALQKAKWLLRAEKAGHTGTLDPLATGLL
PLCFGAGTKFSQVSLDADKAYQATLQLGATTTTGDLEGEVLEERPVSVSREQIEAACATL
RGEIDQVPPMYSALKFEGRPLYEYARAGIQIERPSRRVTIHALDIIDWQDELSQLTVAVR
CSKGTYVRTLAEDLGALLGCGAHLTALRRTASGPVRVEDAISLDALAELTEAEREALLRP
PDSLLADWPEVRLGADEAARFLTGLRRRLNAPDQPHVRVYGPEPQAFLGGAHIKAGELIP
DRLLSPQEVSSLLGV
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgcccgccctccgcgcatcaaaaccgtacgccgtccaattcacggcgtgctc
ttgctggacaagcccttgggctggaccagcaacgacgctttgcaaaaggcgaaatggctg
ctgcgcgctgaaaaagcgggtcacaccggcaccttggatcccctggctactggtttgctg
cccctgtgcttcggcgcaggcaccaagttcagccaagtcagcctggatgccgacaaggct
tatcaagccacgctgcagctcggcgcgaccaccaccaccggcgacctcgaaggcgaggtg
ctggaagagcgtccagtgtcggtaagccgcgaacagatcgaggccgcttgcgccacgctg
cgcggtgagattgaccaagtgccgccgatgtactcggccctcaaatttgaaggccggcct
ttgtatgagtacgcgcgcgccggcatccagatcgaacgcccctcgcgccgtgtgacgatt
catgctttggacatcatcgattggcaagatgagctgagccagctgaccgtggccgtgcgc
tgcagcaagggcacttatgttcgcaccctggccgaagacctgggtgccttgttgggttgc
ggcgcgcatctgaccgctttgcggcggaccgcctccggcccggtgcgggtagaagacgcc
atcagcctggacgccctggctgagctgaccgaggccgagcgcgaggccttgctgcgccca
cccgacagcttgctggcggactggcccgaagtgcgcttaggcgccgacgaagccgcccgc
tttttaaccggtctacggcgccgcctgaacgcccccgaccagccccatgtgcgggtctac
ggacctgaaccccaggcatttttgggcggggcccatatcaaggcgggtgagttgatcccg
gaccgtttgttaagccctcaagaggtgtccagcctcctgggtgtgtaa
DBGET
integrated database retrieval system
