Paucibacter sp. KCTC 42545: AT984_08650
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Entry
AT984_08650 CDS
T04227
Name
(GenBank) lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
pkt
Paucibacter sp. KCTC 42545
Pathway
pkt00330
Arginine and proline metabolism
pkt01100
Metabolic pathways
pkt01110
Biosynthesis of secondary metabolites
Module
pkt_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
pkt00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
AT984_08650
Enzymes [BR:
pkt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
AT984_08650
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DegT_DnrJ_EryC1
Beta_elim_lyase
WHH
Motif
Other DBs
NCBI-ProteinID:
ALT77250
LinkDB
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Position
complement(1949641..1951902)
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AA seq
753 aa
AA seq
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MLRFRFPIVIIDEDYRSENTSGLGIRALADAIQKEGFEVLGATSYGDLSQFAQQQSRASA
FILSIDDEEFTPGPELDPAVLSLRKFIEEIRFKNADIPIYIYGETRTSQHLPNDILRELH
GFIHMFEDTPEFVARHIIREAKSYLDGLAPPFFKALMDYAQDGSYSWHCPGHSGGVAFLK
SPVGQMFHQFFGENMLRADVCNAVEELGQLLDHTGPVAESEKNAARIFNADHCFFVTNGT
STSNKMVWHHTVAPGDVVVVDRNCHKSILHSIIMTGAVPVFMTPTRNHYGIIGPIPESEF
SPAAIRKKIAANPLLKGVDVKTVKPRIMTLTQSTYDGVLYNTETIKKKLDGWIDTLHFDE
AWLPHAAFHSFYGSYHAMGKNRPRPKTAMVYATQSTHKLLAGLSQASQVLVQDSQNVKLD
KHLFNEAYLMHTSTSPQYSIIASCDVAAAMMEPPGGTALVEESISEALDFRRAMRKVEAE
YDQDWWFKVWGPDKLTEDGFGEPADWMLKANEKWHGFGKIAPGFNMLDPIKSTIITPGLD
MSGKFAETGIPASIVTKFLAEHGVVVEKTGLYSFFILFTIGITKGRWNTLLTALQQFKDD
YDRNAPLWRILPEFCAANPRYERMGLKDLCQSIHGMYAKGDIARLTTDVYLSDLQPAMKP
SDAYAYIAHRRTERVPIDDLLGRVTTVLLTPYPPGIPLLIPGERFNKKIVDYLKFTRDFN
AKFPGFATDVHGLVEEKGEDGKSRYFVDCVDAE
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtttccgctttcccatcgtcatcatcgacgaggactatcgctccgagaacacc
tcgggtttgggtatccgtgccttggccgacgcgatccagaaagagggcttcgaagtgctg
ggcgccaccagttacggcgacctgagccagttcgctcagcagcaaagccgcgccagtgcc
ttcatcttgtcgatcgacgatgaggaattcacgcccggccctgagctggacccggccgtg
ctgagcttgcgcaagttcattgaagaaatccgcttcaagaacgccgacatcccgatctac
atctacggcgagacgcgcacctcccagcatctgcccaacgacatcctgcgtgagctgcat
ggcttcattcatatgttcgaggacacgccggagtttgtggctcgccacatcatccgcgaa
gccaagagctatctggatggcctggcgccaccgttcttcaaggcgctgatggactatgcg
caggacggctcctactcctggcattgcccgggtcattccggcggcgttgccttcctgaag
agcccggtcgggcagatgttccaccagttctttggtgaaaacatgctgcgcgccgacgtt
tgcaatgcggtggaagagctgggtcagttgctggaccacaccggcccggtcgcggagtct
gagaagaatgctgcgcgcatcttcaatgccgaccattgcttcttcgtcaccaacggcacc
agcacttcgaacaagatggtctggcaccacacggtggcgccgggcgatgtggtggtggtg
gaccgcaactgccacaagagcatcttgcacagcatcatcatgaccggcgccgtgccggtg
ttcatgacgcccacgcgcaatcactacggcatcatcggcccgattcccgagagcgagttc
tcgccggccgccatccgcaagaagattgccgccaacccgctgctcaagggtgtggatgtc
aagaccgtcaagccgcgcatcatgaccctgacgcaaagcacctacgacggcgtgctctac
aacaccgaaaccatcaagaagaagctggacggctggatcgacaccctgcatttcgacgaa
gcctggctgccgcacgcggccttccatagcttctacggcagctatcacgccatgggcaag
aaccgcccgcggcccaagacggccatggtctacgcgacccagtccacccacaagctgctg
gctggcctgagccaggcttcgcaagtgctggtgcaggactcgcagaacgtcaagctggac
aagcatttgttcaacgaagcgtacttgatgcacacctccaccagcccgcagtactccatc
atcgccagctgcgatgtggcggcggccatgatggagccgcccggtggcacggccttggtg
gaggagagcatctccgaagccctggacttccgccgcgccatgcgcaaggtcgaggccgag
tacgaccaagactggtggttcaaggtctggggtccggacaagctgaccgaagacggcttt
ggcgagccggctgactggatgctcaaggcgaacgaaaagtggcatggcttcggcaagatc
gcccccggcttcaatatgctggatccgatcaagtcgaccatcatcacccccggcctggac
atgagtggcaagtttgctgagaccggtattccggccagcatcgtcaccaagttcttggcc
gagcatggcgtggtggtggagaagacgggtctgtattccttcttcatcctcttcaccatc
ggcatcaccaagggtcgctggaataccttgctgacggcgctacagcagttcaaggacgat
tacgaccgcaatgcgccgctgtggcgcatcctgccggagttctgtgcggccaatccgcgt
tacgagcgcatgggtctgaaggatctgtgccagagcatccatggcatgtatgccaagggt
gatatcgcgcgcctgacgacggacgtttatttgtcggacctgcagccggccatgaagccc
agcgatgcttatgcctacatcgcccatcgccgtaccgagcgggtgccgatcgatgatttg
ctgggccgggtcacgaccgtgttgctgacgccttatccgcccggcatccccttgctgatt
cccggtgagcgtttcaacaagaagatcgtggactatctgaagttcacccgcgacttcaac
gccaagttccccggctttgccaccgatgtgcatggcttggtcgaagagaagggcgaggac
ggcaaatcgcgttacttcgtcgattgcgtggacgctgagtaa
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