Paucibacter sp. KCTC 42545: AT984_08890
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Entry
AT984_08890 CDS
T04227
Name
(GenBank) PEP-CTERM-box response regulator transcription factor
Organism
pkt
Paucibacter sp. KCTC 42545
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
AAA_16
HTH_28
AAA_3
AAA
HTH_17
AAA_7
AAA_2
IstB_IS21
HTH_30
DUF2617
AAA_30
nSTAND3
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
ALT77292
UniProt:
A0A0U3DAY6
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Position
complement(2012383..2013750)
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AA seq
455 aa
AA seq
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MSSERPSAPLLIVEDDLALQKQLKWSLDRYESVVADDVASAVLQFRRHSPAVVTMDLGLP
PDQDSVSEGFRCLEKLLEIDPAVKVIVLTGQNDQDNALRAIRMGAYDFLAKPVEPEVLSL
TVERAYRLYELQQENRRLQTAQQTEALSGLVTRDPGMLRICRTLEKVASSDATVLLLGES
GTGKELLAQGLHETSKRKGRFVAINCAAIPENLLESELFGYEKGAFTGASKTTVGKIETA
NGGTLMLDEIGDLPMALQAKLLRFLQERSIERVGGRQEIPIDIRVLGATHQNLKSLISEG
KFREDLYYRLAEIVLEIPPLRERCGDAVLLANVFLKKYAAERRRPTMSFAEDAVRAIELH
QWPGNVRELQNVVKRASIMADGDRVTVQDIDLPVEVPDLESNDSFPSLKVVRENAEREAV
VNALARSNGNIGKAALMLGVSRPTLYDLMSKLNIT
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgaacgcccttcggctccattgttgatcgtagaagatgatctagccctgcaa
aaacaattgaaatggtccttggaccgttatgaatcggttgtagcggacgacgtcgcttcc
gcggtgttgcagttccggcgtcactcgccggccgtggtcactatggacctcggtttgccg
ccagatcaagattcggtgtctgaaggcttccgatgtttggagaagttgctggagattgac
ccggccgtaaaagtcatcgtcttgactgggcaaaacgatcaagacaatgccttgcgggcg
attcgaatgggcgcctacgactttctcgctaaacccgtggaacccgaagtcctaagtttg
acggtcgagcgggcctatcgtttgtatgaactgcaacaggaaaaccggcgtttgcagact
gcgcaacagactgaagcgctaagtggcttggtgacccgcgatcccggcatgctccgtata
tgcagaacgctggaaaaggtggcgagcagcgatgccactgttttattgctgggtgaaagc
ggcaccggcaaagagctcttggctcaaggtctacacgagacctccaaaagaaaggggcga
ttcgttgctatcaattgcgcagcgatccccgagaatctgttggaaagtgagctttttgga
tacgaaaagggtgcttttacaggcgcgtcaaaaactaccgtaggaaagatagaaaccgcc
aacggtggaactttgatgttggatgaaattggcgatctgccaatggcattgcaagccaaa
ttactgcgcttcttgcaagagcggagcattgaacgtgttgggggacgccaggaaataccc
attgatatcagggtgctaggcgccacgcatcaaaatttgaaaagcttgatcagcgaaggc
aaattccgcgaggacttgtactatcgcttggccgaaattgtgcttgagattccgccttta
cgggaacgctgtggtgatgcagttttgttggccaatgtctttttgaaaaaatatgcagca
gagcggcgtcggccgaccatgagttttgctgaggacgcggtacgagccattgaattgcac
caatggcccgggaatgtccgggaattgcaaaatgtggtgaaaagagcctccattatggcg
gatggggatcgggtcacagtgcaagatattgacctacctgttgaagtcccggatcttgag
tccaatgacagtttcccaagccttaaggttgttcgtgaaaacgccgagcgtgaggctgtg
gttaacgcattggcacgctccaacggaaacattggtaaagcagcgttaatgcttggggtg
agtcgccccactctttacgacttgatgagcaaattgaatataacttga
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