Paucibacter sp. KCTC 42545: AT984_09075
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Entry
AT984_09075 CDS
T04227
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pkt
Paucibacter sp. KCTC 42545
Brite
KEGG Orthology (KO) [BR:
pkt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pkt03016
]
AT984_09075
Enzymes [BR:
pkt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AT984_09075
Transfer RNA biogenesis [BR:
pkt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AT984_09075
Prokaryotic type
AT984_09075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ALT79744
LinkDB
All DBs
Position
complement(2053749..2054534)
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AA seq
261 aa
AA seq
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MRVALGVSYRGQAYHGWQSQVDGQTVQDVLEAALSEFAATPIRSICAGRTDTGVHGLNQV
VHFDTEISREAASWVRGTNRYLPADVAVQWCRFPGDEFHARFSAQGRRYAFLVLESVVRP
AIEAGGVGWVFRPLDAEAMRAAADLLIGEHDFSAFRAAQCQAKSPIKTLRKISISRRGAY
WRFDFDASAFLHHMVRNIMGCLIAVGNGSQSLEWLAQVLAARDRALAAPTFPADGLYFMG
PYYEPQFDIPEHTATMDWLPG
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttgcgctgggagtgagttaccgcggtcaggcctatcacggctggcaaagccag
gtggatgggcaaacggttcaggatgtgctggaagccgccctgagcgaattcgcggccacg
ccgatccgcagcatttgcgccggccgcacggataccggggtgcatggcctcaaccaagtg
gtgcatttcgataccgagatcagccgcgaggccgcctcctgggtgcgtggcaccaaccgt
tacttgcccgccgacgtggcggttcagtggtgccgctttccgggtgatgaatttcatgcg
cgcttctccgcgcaaggccggcgttatgcctttttggtgctggagtcggtggtgcgcccg
gccatcgaagcgggtggtgtgggctgggtgtttcgtccgctcgacgctgaggccatgcgc
gcggcggcagacctgctgatcggcgagcacgacttcagcgcttttcgcgccgcccaatgc
caggccaaatcgcccatcaaaaccctgcgcaagatcagcatcagccgacgcggtgcctac
tggcgctttgactttgatgcctcggcctttttgcaccatatggtgcgcaacatcatgggt
tgcttgatcgccgtgggcaatggcagccagtcgctcgagtggttggctcaggtcttggcg
gcgcgtgatcgtgccttggccgcgcccacctttccggccgatgggctttacttcatgggg
ccgtactacgagcctcagtttgatattcccgaacacaccgcaaccatggactggctgccc
ggatga
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integrated database retrieval system
