Paucibacter sp. KCTC 42545: AT984_11530
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Entry
AT984_11530 CDS
T04227
Name
(GenBank) tetracycline transporter
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
pkt
Paucibacter sp. KCTC 42545
Brite
KEGG Orthology (KO) [BR:
pkt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pkt02000
]
AT984_11530
01504 Antimicrobial resistance genes [BR:
pkt01504
]
AT984_11530
Transporters [BR:
pkt02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
AT984_11530
Antimicrobial resistance genes [BR:
pkt01504
]
Gene variants
Tetracycline resistance genes
Transporters
AT984_11530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_1_like
MFS_3
Motif
Other DBs
NCBI-ProteinID:
ALT79818
LinkDB
All DBs
Position
complement(2653988..2655202)
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AA seq
404 aa
AA seq
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MGFIMVAVLIDMISIGLIIPVLPPLVGTFTSNQADHAFWYGAVALAFGLANFFGSPILGS
LSDRFGRRPVLLIGFAGLALSFFGTALASALWMLIAIRLVSGAMQANVSVANAYVADISS
PEERAKRFGMLGAAFGMGFILGPVMGGILGGINLHLPFVVAGSLAVINWCYGFFILPESL
KPELRRPFLWRNANPLGALKKLNNLKGVGPLVLVIALSGLAQMILQTSWVLYTTFKFGWG
PKENGWSLFAVGVMSVLVQGFLLPKLLKAFSTQRLVVMGLLSSVLTNFVWGAAWEGWMMY
AIIGFNVLGFAVSAAIQSLISNAANATNQGETMGAVSSLNSMMAVMAPVIGAALLGLVSH
LPKGDWRIGAPFYFCAALQALSLFFAWQHFSRSKAAAESASAAA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcatcatggtggcggtgctgatcgacatgatctccatcggcctgatcattccg
gtgctgccgcccttggtcggcaccttcaccagcaaccaggccgaccacgcgttttggtat
ggcgccgtggccctggcctttggcttggccaacttcttcggttcgccgattctgggctcc
ttgtctgaccgcttcgggcgccggccggtcttgctgatcggcttcgccggcctggcgctg
agctttttcggtaccgccctggcctcggccttgtggatgctgatcgcgatccgcttggtc
agtggcgcgatgcaggccaatgtgtcggtggccaacgcctatgttgcggatatttccagc
ccggaggagcgagccaagcgctttggcatgttgggcgcggccttcggcatgggcttcatc
ctgggcccggtgatgggcggcattctggggggcatcaaccttcatctgccctttgtggtg
gccggcagcctggccgttatcaactggtgctatggctttttcattctgcccgaatcgctc
aagcctgagctgcggcggccctttctctggcgcaatgccaatccgctgggcgcgctgaag
aagctcaacaacctcaagggcgtcggccccttggtgttggtgatcgcgctgagcggcctg
gcgcaaatgattctgcaaaccagctgggtgctttacaccaccttcaagttcggctggggc
cccaaggaaaacggctggtcgctgtttgcggtgggtgtgatgtcggtgctggtgcagggc
tttttgctgcccaagctgctcaaggccttctcgacgcagcgcttggtggtgatgggcttg
ttgtccagcgtactgaccaactttgtttggggtgcggcctgggagggctggatgatgtac
gccatcatcggcttcaatgtgctgggctttgcggtcagcgcggcgattcaaagcctgatt
tccaacgcggccaacgccaccaaccagggcgagaccatgggggccgtgtcctcactcaat
agcatgatggcggtgatggcgcccgtcatcggtgcggccttgctgggcttggtctcgcat
ctgcccaagggggattggcgcatcggcgcgcctttctatttctgcgccgcgctgcaggcc
ctgtccttgttctttgcttggcagcatttcagccgatccaaggccgcggctgagtcagct
tcggccgccgcttga
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