Paucibacter sp. KCTC 42545: AT984_12125
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Entry
AT984_12125 CDS
T04227
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pkt
Paucibacter sp. KCTC 42545
Pathway
pkt03030
DNA replication
pkt03430
Mismatch repair
pkt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AT984_12125
03430 Mismatch repair
AT984_12125
03440 Homologous recombination
AT984_12125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkt03032
]
AT984_12125
03400 DNA repair and recombination proteins [BR:
pkt03400
]
AT984_12125
Enzymes [BR:
pkt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AT984_12125
DNA replication proteins [BR:
pkt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AT984_12125
DNA repair and recombination proteins [BR:
pkt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AT984_12125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ALT77817
LinkDB
All DBs
Position
complement(2783352..2783984)
Genome browser
AA seq
210 aa
AA seq
DB search
MLWQQIKRRWLLYHLGEPAFAPMFEAPPEDEWVSLDCETTGLDPQRDEIIAIGAVRIKGN
RVLSSQRLDLLVRPEKKAISAEAVKVHGLLAQDVAGGVDIDTAMRQLLHFIGPRPLVGYY
LEFDVALINRAIFPLLGLGLPQPKLEISSMYYDWKQRHLPPYQHGASIDLRLATLMQDLG
LPERRAHNALNDAIMAALAFVKLRNLLAEK
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgctctggcaacaaatcaaacgccgctggttgctctaccacctgggtgagccggccttc
gcgccgatgttcgaggcgccgccggaggacgagtgggtgtcactggactgcgaaaccacc
ggcctggatccgcagcgtgacgagatcattgccatcggcgcggtacgcatcaagggcaat
cgggtgctgagcagtcagcgcctggacctgctggtgcggcccgagaagaaagccatctcg
gcggaggccgtcaaggtccatggcctgctggcgcaagacgtggcgggcggggtggacatt
gacaccgcgatgcgccagttgctgcacttcatcggcccgcggcccttggtgggctactac
ctggaattcgatgtggcgctgatcaaccgcgccatctttccgctgctgggcctggggctg
ccccagcccaagctggaaatctcctcgatgtattacgactggaagcagcgccatctgccg
ccttatcagcatggcgccagcatcgatctgcgcctggccaccttgatgcaggacctgggc
ctgcccgagcgccgcgcccacaacgcactcaacgacgccatcatggcggcgctggccttt
gtgaagctgcgcaatttgctggccgagaagtag
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