Paucibacter sp. KCTC 42545: AT984_13145
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Entry
AT984_13145 CDS
T04227
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pkt
Paucibacter sp. KCTC 42545
Brite
KEGG Orthology (KO) [BR:
pkt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkt03400
]
AT984_13145
Enzymes [BR:
pkt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
AT984_13145
DNA repair and recombination proteins [BR:
pkt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
AT984_13145
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
ALT77985
UniProt:
A0A0U3F2T1
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All DBs
Position
3022977..3024563
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AA seq
528 aa
AA seq
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MSRVRHLVLVLGDQLDLDAAAFDGFDPSQDAVWMAEVAEESTQVWSSKQRSALFLSAMRH
FAEALRAAGRPLHYRRLEDPANLGSLAAELQAALATLAPQRVLMTAPGDWRVWQAIKACI
QAAEPSTTALGEAGLGPELEVREDRHFYTTVRQFAAHAKGRKQLRLEYFYRELRQRHGVL
MDEGQPCGGQWNFDADNRAAFGPAGPGLLPARATFEPDAITREVIELVNTRFAHHPGTLD
SFAWPVTREQALQALQRFIEERLPLFGRYEDAMWPGEPWLYHSQLSAALNLKLLGAREVV
DAAEAAYRAGRVPLASAEGLIRQILGWREFVRGVYWTQMPAYAERNALAAQHPLPAWYWT
GQTDMACLRDAITQTLAHGYAHHIQRLMVTGLFALLLGVRPQQVHEWYLAVYVDAVEWVE
LPNTLGLSQYADGGLMASKPYVASGKYIQGMGGPCSQCRYDPALRSGERACPYTTLYWDF
LIRHQTLLSQNARTALQVKNLSRLSEADRQAVQERAEAIRSGAVGAAA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgtgcgccatctggtgctggtgctgggcgaccaactcgacctggacgccgcc
gccttcgacggcttcgaccctagccaagacgcagtgtggatggccgaggtggcggaggag
tccacccaagtctggtccagcaaacagcgcagcgccctgttcctttccgcgatgcgccat
ttcgctgaagccctgcgtgcggcgggccgcccgctgcactaccggcggctggaggacccc
gccaatctcggcagcctggccgccgagttgcaagccgccctggccaccttggcgccgcag
cgggtgctgatgacggcgccgggggactggcgcgtctggcaagccatcaaagcctgcatt
caagcggccgagccatccacaacagcgcttggggaagcaggcctcgggcctgagctggag
gtgcgcgaggaccgccatttctacaccacggtgcgccagttcgccgcccatgccaagggc
cgcaagcagctgcgcctggagtatttctaccgcgaactgcgccagcgccatggcgtgttg
atggacgagggccagccctgcggcgggcagtggaatttcgacgccgacaaccgcgccgcc
ttcggccccgccggccccggcctgctgccagcgcgcgcgacgtttgagcccgatgcgatc
acgcgcgaggtcatcgaactggtgaacacacgcttcgcccaccaccccggcacgctggac
agctttgcttggcctgtcacgcgggagcaggcgctgcaagccctgcagcgattcatcgag
gaacgcctgccgctgttcggccgctatgaagacgccatgtggccaggcgagccctggctg
tatcactcacagctctcggctgcgctcaatctcaagctgctcggcgcgcgagaggtagtg
gacgcggcggaagccgcctaccgcgccggccgggtgccgctggccagcgccgaaggcctg
atccgccagatcctgggctggcgcgagtttgtgcgcggcgtttactggacacagatgccg
gcctatgccgagcgcaatgccttggctgcgcagcatcccctgccggcttggtactggacc
ggccagaccgatatggcctgcctgcgcgacgccatcacgcaaacgctggcgcatggctat
gcccaccacatccagcgcctgatggtgaccggcctgttcgcgctgctgctgggcgtgcgg
ccacagcaggtgcacgagtggtatctggccgtgtatgtagacgcggtggaatgggtggag
ttgccgaacaccttgggcctgagccagtacgccgacggcggcctgatggccagcaagccc
tatgtggccagcggcaaatacatccaaggcatgggcggcccctgctcgcaatgccgctac
gaccccgcgctgcgcagtggtgagcgcgcctgcccttacaccaccctgtactgggacttt
ttgatccgccaccaaaccctgctgagccagaacgcccgcaccgccttgcaggtgaagaac
ctgagcaggctcagcgaagccgaccggcaagccgtgcaagagcgcgccgaggccatacgc
agcggcgctgttggcgcagcggcttag
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