Paucibacter sp. KCTC 42545: AT984_14340
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Entry
AT984_14340 CDS
T04227
Name
(GenBank) Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
pkt
Paucibacter sp. KCTC 42545
Pathway
pkt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pkt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AT984_14340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pkt02022
]
AT984_14340
02035 Bacterial motility proteins [BR:
pkt02035
]
AT984_14340
Two-component system [BR:
pkt02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
AT984_14340
Bacterial motility proteins [BR:
pkt02035
]
Pilus system
Twitching motility proteins
AT984_14340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_50
AAA_16
AAA_5
AAA
AAA_7
cREC_REC
Motif
Other DBs
NCBI-ProteinID:
ALT78188
LinkDB
All DBs
Position
complement(3305559..3307163)
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AA seq
534 aa
AA seq
DB search
MSTANPIFSLLVVDDEPDLRTLYELTLLREGYEMETAGTVSDALRHLQARSFSAVITDMR
LPDGSGLDILQWLEAQGRQEKALVITAFGSAENAVEALKAGAYDYLTKPVDLRQFRLVVA
SALGRMPATAATVQTSQLPSQQALNASEAATAAIAAKAAAPNKPAALAPTQASFAAPARP
QAMPAQTAAAAALSRLAGQSAAMQEVRALIDKVARSMAPVLVQGESGTGKELVARAIHDS
GPRARQRFVAVNCGAIPEQLLEAEFFGYRKGAFTGANEDREGFFQTADGGTLFLDEIGDL
PLAMQSKLLRCIQERSVRPVGAVVETPVNVRILSATHKDLGSEVTAGRFRQDLFYRLNVI
QLRVPPLRERIEDIPLIADKVLSRIAADAGVSPTPRLTPAALAQLTRYAFPGNVRELENL
LHRALAMSGGEWIDAPDLGLPESMLDEVEPLDAGDALPPASALREKAAGLPSLAPGDIPA
DLAVYLDEVEREILLRALERHRFNRTAAGASLGLSLRQIRYRMARLGITEGEGG
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagcgaacccgatctttagcctgctggtggtggacgatgagcccgatctgcgc
acgctctacgagctgaccctgctgcgcgaaggctatgaaatggagacggccggcaccgtc
agcgatgccttgcggcatttgcaggcgcgcagcttcagcgccgtcatcaccgatatgcgc
ctgcccgatggcagcgggctggacatcttgcaatggctggaggctcaaggccggcaagaa
aaggctctggtgatcaccgcctttggctcggccgaaaacgcggttgaggcgctcaaggcc
ggggcttatgactacctgaccaagccggtggacctgcgccagttccgcctggtggtggcc
tcggccctgggccgtatgccggccacggccgcgaccgtgcaaacctcgcaactgcccagc
cagcaggctttgaatgccagcgaggcggccaccgccgcaattgccgccaaggccgccgca
cccaacaagcctgccgcgcttgcgcctacgcaggcctcattcgctgcgccagccaggccg
caagccatgcccgcgcagacagccgccgcggcggccttgtcgcgcttggccggtcagtcc
gccgccatgcaagaggtgcgagccttgatcgacaaagtggcccgcagcatggcgccggtg
ctggtgcagggcgagtccggcaccggcaaggaattggtggcgcgcgccattcacgacagc
ggcccgcgcgcgcgtcagcgctttgtggccgtcaattgcggcgccatccctgagcaactg
ctggaagctgagttcttcggctaccgcaagggcgctttcaccggcgccaacgaagaccgc
gagggctttttccagacggccgatggcggcactttgttcttggatgaaatcggcgatctg
ccgctggccatgcagagcaaactgctgcgctgcattcaggagcgctcggtgcgaccggta
ggggcggtggtggaaacgccggtgaatgtgcgcatcctcagtgccacccacaaagacctg
ggcagcgaggtgacggcggggcgcttccgccaggatttgttctaccgactcaacgtcatc
caactgcgcgtaccgccactgcgtgagcgcatcgaagacatcccgctgattgccgacaag
gtgctgagccgcatcgcggccgatgctggcgtgtcacccacgccgcgcctgaccccggcg
gcgctggcccagctgacccgctatgccttccccggcaatgtgcgtgagctggaaaacctg
ttgcaccgtgcgctggcgatgtcgggtggtgagtggattgacgcgcccgatctgggcctg
cccgagtccatgctggatgaggtggagccgctggatgcgggtgatgcgctgccgccggcc
tcagccttgcgcgaaaaagcagccggcctgcccagcttggcgcccggggacatcccggcg
gatctggcggtttatctggacgaggtggagcgcgaaatcttgctgcgcgcgctggagcgc
catcgtttcaatcgcaccgccgcgggcgccagcctgggcctgtctttgcggcaaatccgc
taccgcatggcgcggctgggcatcaccgaaggcgagggcggctga
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