Paucibacter sp. KCTC 42545: AT984_15980
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Entry
AT984_15980 CDS
T04227
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
pkt
Paucibacter sp. KCTC 42545
Brite
KEGG Orthology (KO) [BR:
pkt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkt03000
]
AT984_15980
Transcription factors [BR:
pkt03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AT984_15980
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HVO_A0261_N
Motif
Other DBs
NCBI-ProteinID:
ALT78466
LinkDB
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Position
complement(3709038..3709928)
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AA seq
296 aa
AA seq
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MQLDQLNFHHLFYFWRVAKLGHLTRAAEELHTSQSAVSSQIRQLEERLGEDLFAREGRRL
TLTDTGQLVLAYAENIFGLGQEMLGRLQGRMAGITRLRVGSVATLSRNYQENWIRPLLAD
PTVVLTLESGLLEGLIARLLQHQLDVVLANETVPADPSRPLHCRFLGSQAISLVGPASRW
QAQSLRMPEDLDGLDIALPGPRHALRAQFDALCASAGVTPRLRAEVDDMAMLRLIARDSG
WLTVLPQVVVQDELRAGTLVPVAQSSALQERFYAITTPHRHRIEALEHLMDRMPEG
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcgatcagctgaactttcatcacttgttctacttttggcgggtcgccaagctg
gggcatctgacgcgcgccgccgaagagctgcacacctcgcaatcggcggtgtcctcgcag
attcggcagttggaagagcgcctcggcgaagacttgtttgcccgcgaggggcgccgccta
acgctgacggacaccggccaattggtgctcgcgtatgcggagaacatctttggtctcggc
caggaaatgctgggccggctgcagggccgcatggccggcatcacgcgtttgcgggtcggc
agtgtggccaccttgtcgcgcaactatcaggagaactggattcggcctttgctggcggac
cccacggtggtcttgaccctggagtccgggctgctggagggcttgatcgcgcggctgttg
cagcatcagctggatgtggtgctggccaacgaaaccgtgcccgccgatccgtcgcggccg
ctgcattgccgcttcctgggcagccaggcaatctccttggtcggcccggcgagccgctgg
caagcgcaaagcctgcgtatgcccgaggatctggacggtctggatatcgccttgcccggg
ccacgccacgcgctgcgggcgcagttcgatgcgctgtgcgcttcggcgggtgtaacgcct
cggctgcgggccgaagtggacgatatggccatgctgcgtttgattgcgcgtgacagcggc
tggttgaccgtgctgccgcaagtggtggttcaagatgagttgcgagccgggaccttggtc
cccgtcgcgcagtcaagcgccttgcaagagcgcttttacgccatcaccacgccgcaccgg
caccgcatcgaggcgcttgagcatttgatggatcgaatgcctgagggctga
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