Paucibacter sp. KCTC 42545: AT984_16180
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Entry
AT984_16180 CDS
T04227
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pkt
Paucibacter sp. KCTC 42545
Brite
KEGG Orthology (KO) [BR:
pkt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkt03032
]
AT984_16180
03036 Chromosome and associated proteins [BR:
pkt03036
]
AT984_16180
03400 DNA repair and recombination proteins [BR:
pkt03400
]
AT984_16180
DNA replication proteins [BR:
pkt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AT984_16180
Chromosome and associated proteins [BR:
pkt03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AT984_16180
DNA repair and recombination proteins [BR:
pkt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AT984_16180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
MID_pPIWI_RE
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ALT78498
UniProt:
A0A0U2VZ67
LinkDB
All DBs
Position
complement(3761381..3761740)
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AA seq
119 aa
AA seq
DB search
MNKTELIEHLAAKHSLTKAEAGRILETLLDAVVTTVKKGGAVSIPGFGSFKQHARAARTG
VNPSTGDKIKIAAAKLPKFTPGAGFKAAVDPKAAARKAAKAAETAAKTAAKPAAKKAKK
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaccgaactgattgaacacctggcagccaagcactcgctgaccaaggccgaa
gccggccgtatcctggaaaccctgctggacgccgtggtcaccaccgtcaaaaagggcggc
gccgtgtcgattcccggctttggttcgttcaagcagcacgcacgtgccgcccgcactggc
gtgaaccccagcaccggcgacaagatcaagatcgccgcagccaagctgcctaagttcact
cctggcgctggcttcaaggccgccgtggaccccaaggctgctgctcgcaaggctgccaag
gctgctgaaacagccgccaagactgctgccaagcccgctgccaagaaggccaagaagtaa
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