Paucibacter sp. KCTC 42545: AT984_16285
Help
Entry
AT984_16285 CDS
T04227
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pkt
Paucibacter sp. KCTC 42545
Pathway
pkt03420
Nucleotide excision repair
pkt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pkt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AT984_16285
03430 Mismatch repair
AT984_16285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkt03400
]
AT984_16285
Enzymes [BR:
pkt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AT984_16285
DNA repair and recombination proteins [BR:
pkt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AT984_16285
MMR (mismatch excision repair)
Other MMR factors
AT984_16285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ALT78516
UniProt:
A0A0U3DQN9
LinkDB
All DBs
Position
complement(3781762..3783717)
Genome browser
AA seq
651 aa
AA seq
DB search
MSDSVFVPQRIQPSAEQLLIQTTRARHVLIEANAGSAKTSTLALRIAQALTRGARPDMVL
ALTYTAPAVQALRTQLRLIGLAAEQIEQMHIHSFESFSAALLAEREGPGTELLATPTLVK
PFVVRAIERAQTLPEERYPDELTLGMPPGALVEGLLRSFEVIKGRMLIEQLDEGARITPD
LAETLGFDYLTLRVRSAYELIRRGGHPDHPAFRFEGDATYDLAHAIMAEEFSAEDSPFAL
GLALIVVDEMHDTNRAMFTILKALLGANRRAAFVGVGDRDQVIHSQAGAEAGFMAEHFEH
EIGAPLRLPLTASHRFGPVLAQAVGALAGKPYAAVEQLATQIVSLPCESTRVMARLIAQV
AREHMGQSQQDELRILLRQPAYSIPIERELLQLGLDYACAGVQPFLQRPEILLVRGLQAF
CMDDFSGFKTKAQRAAVLAALMQFAGALIDSIELRHVDALTAQRRAIDEAASDPDGMRSF
IEGQVLRNASATALPLLRDAISVLKMNDLPAFVDVFMAALKPQRLAQAVLVRKDDIEQVR
ANVEQLLQLAQQEGGELADVFRVLHQLEAQQLRMRANRRITLSSIEAAKGLEFDHVLIPH
LSRGEFSGDVSAAENRNLLYVAMTRARQRLTLAFNPASPSRYLLDAGLLSA
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattcagttttcgtcccgcagcgcatccagcccagtgccgagcagttgctcatt
caaaccacgcgggctcgccatgtgctgatcgaggccaatgccggctccgccaagacctcc
accttggccttgcgcattgcccaagcgctgacgcgcggcgcccggccggacatggtgctg
gcgctgacctataccgccccggcggtgcaggccttgcgcacgcagctgcgcctgattggc
ctggcggcggagcagatcgagcagatgcatatccacagcttcgagtccttcagcgcggct
ttgctggccgaacgtgaagggccgggcacggagctgctggccacgcccacgctggtgaag
cccttcgtcgtgcgcgccatcgagcgggcgcagaccctgcccgaagagcgctaccccgat
gagttgacgctgggaatgccgcccggcgccttggtggaaggcttgctgcgctcgtttgag
gtgatcaaagggcgcatgttgatcgagcaattggacgagggtgcccgcatcacgcccgac
ctggccgagaccttgggctttgactatctgaccctgcgcgtgcgctccgcctacgagttg
atccggcgcggcggccacccggaccatccggcctttcgcttcgagggcgacgccacttac
gacctggcccacgccatcatggcggaggagttcagcgccgaggactcgccctttgcgctg
ggtctggcgctgatcgtggtggatgagatgcacgacaccaaccgcgccatgttcaccatt
ctgaaggccttgctgggcgccaaccgccgcgccgcctttgtgggcgtgggtgaccgcgac
caagtgattcactcacaggccggcgccgaggccggcttcatggccgagcattttgagcat
gagattggcgcacccctgcgcttgcccctcacggccagccatcgcttcggccccgtcttg
gcacaggccgtgggcgcgctggcgggcaagccttatgcggccgtcgagcagttggcgacg
cagatcgtcagcctgccttgtgaatccacccgcgtgatggcgcgcctgatcgcgcaagtg
gcacgcgagcatatgggtcagagccagcaagatgagttgcgcatcttgttgcgccaaccc
gcctattccatcccgatcgagcgcgaattgctgcagctgggcctggactatgcctgcgcc
ggcgtgcaaccatttttgcagcggccggagattttgctggtgcgcggcctgcaggctttt
tgcatggacgacttcagcggcttcaagaccaaggcgcagcgcgcggcggtgctggccgcg
ctgatgcagttcgccggtgccttgatcgacagtatcgagctgcgtcatgtcgatgcgctg
accgcgcagcgccgggccatcgacgaggccgccagcgaccccgacggcatgcgcagcttc
atcgagggtcaggtcttgcgcaatgcctcggccaccgccttgccgttgctgcgtgacgcc
atcagcgtgctcaagatgaatgatttgccggcttttgtggatgtcttcatggctgcactc
aagccgcagcgcctggcccaagcggtgctggtgcgcaaagatgacatcgagcaggtgcgc
gccaatgtggagcaactgctgcagctggcgcagcaagaaggtggcgagctggccgatgtg
ttccgcgtgctgcatcagctggaggcgcagcagctacgcatgcgggccaatcgccgcatc
actctgtccagcatcgaggcggccaagggtctggaattcgaccatgtgctgatcccccac
ctctcacgcggtgagttcagcggcgatgtcagcgccgcggagaaccgcaatctactttat
gtggcgatgacgcgcgcccggcaacgcctgaccctggcgtttaatcccgccagcccctcg
cgctatctgctcgacgctggcttgctgagcgcttag
DBGET
integrated database retrieval system
