Paucibacter sp. KCTC 42545: AT984_17065 Help Entry AT984_17065       CDS       T04227                                  Name (GenBank) RNA polymerase sigma-54 factor   KO K03092   RNA polymerase sigma-54 factor Organism pkt  Paucibacter sp. KCTC 42545 Pathway pkt02020   Two-component system pkt02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:pkt00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     AT984_17065  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     AT984_17065  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pkt03021]     AT984_17065 Transcription machinery [BR:pkt03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      AT984_17065 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38 NNH6 HTH_IclR HTH_23 HTH_5 Motif Other DBs NCBI-ProteinID:  ALT78646 LinkDB All DBs Position 3980231..3981745 Genome browser AA seq 504 aa AA seqDB search MKQSLQLRLSQHLSLTPQLQQSIRLLQLSTLELNQEIEQMMAQNPLLDTEDDISVAAPEI SEPLRASAADDSSADTELGGGADAESTPELRAEDFGSTERDDWENGTERDDFDGIRELPS NHNSGSASNDGDDDRSEQEFAEISLQEHLNQQLAGMHLSQADRMALQVLIESLGEDGYLE DTLEDIAQALTTDAEEQEELLDHLRIALKWLQNMDPGGVGARDLAECLTLQLRALPRSPA QVIAILICKSHLELLAKRDSKKLMALTGADEPLLREAQALIRALDPKPGRRFAQGQSQAV IPDVIVRKVGRELRVMLNPEVAPKLRINEMYANALRQTRGGISNSALGGQLQEARWFIKN IQQRFDTILRVSKAIVERQKGFFTHGALAMKPLVLREIADELGLHESTISRVTTAKYMAT TFGTFELKYFFGSGLSTEAGGNASSTAVRALIKQFVEAEAPNKPLSDSALANMLEEQGIQ VARRTVAKYREALKIAPANLRKPC NT seq 1515 nt NT seq  +upstreamnt  +downstreamnt atgaaacagtcgctccagctgcgcctgagccagcatctctcgctgaccccgcaattgcag caatcgatccggctgctgcaactctcgaccctggagctgaaccaggaaatcgagcaaatg atggcgcagaaccctctgctcgataccgaggatgacatcagcgtggccgcgcccgagatc agcgagccgctacgcgccagcgccgccgacgacagcagcgccgacaccgagctgggcggc ggcgccgacgccgagagcacgccggagttgcgggccgaagacttcggtagcaccgagcgc gacgactgggagaacggcaccgagcgcgatgacttcgacggcatccgcgagctgcccagc aaccacaacagcggcagcgccagcaatgacggcgacgacgatcgcagcgagcaggagttc gccgaaatcagcctgcaagagcatttgaatcagcagctggccggcatgcacctcagccag gccgaccgcatggccttgcaagtgctgattgagtcgctgggcgaagacggctacctggaa gacacactggaagacatcgcccaagcgctcaccactgatgccgaggaacaagaagagctg ctggaccatctgcgcatcgccctgaagtggttgcagaacatggaccccggcggcgtcggc gcacgcgacctggccgagtgcctaacgctgcaattgcgcgcactaccgcgcagcccggcg caggtgatcgccatcctgatttgcaaatcacatctggaactgctggccaagcgcgatagc aaaaagctgatggcgctgaccggtgccgacgagcccctgctgcgcgaagcgcaagcgctg atccgcgccctcgaccccaaaccggggcggcgcttcgcgcaaggccagtcgcaggcagtg atcccggatgtgatcgtgcgcaaggtcggccgcgagctgcgcgtgatgctcaaccccgag gtcgcccccaagctgcgcatcaatgagatgtatgccaacgccctgcggcaaacccgcggc ggcatcagcaatagcgcgctgggtggccagctgcaggaagcgcgctggttcattaaaaac atccagcagcgcttcgacaccattttgcgtgtctccaaagccatcgtggagcggcaaaaa ggcttcttcacccacggtgccctggccatgaagcccctggtgctgcgcgagattgccgac gagctgggcctgcacgagtccaccatctcacgcgtcaccaccgccaaatacatggccacc accttcggcacttttgagctgaagtacttcttcggctcgggcctgagcaccgaggccggc ggcaatgcctccagcaccgccgtgcgcgcgctgatcaagcaattcgttgaggcggaagcg ccgaacaagccgctgtctgacagcgccttggccaacatgctggaagagcaaggcatccag gtggcgcggcgcaccgtggcgaaataccgcgaagcgctgaagatcgcccccgccaatttg cgcaaaccctgctga

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