Paucibacter sp. KCTC 42545: AT984_17505
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Entry
AT984_17505 CDS
T04227
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pkt
Paucibacter sp. KCTC 42545
Pathway
pkt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pkt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AT984_17505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkt03400
]
AT984_17505
Enzymes [BR:
pkt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AT984_17505
DNA repair and recombination proteins [BR:
pkt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AT984_17505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ALT79975
LinkDB
All DBs
Position
complement(4090813..4091613)
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AA seq
266 aa
AA seq
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MRFITANLNGIRSAATKGFFDWLPAQQADALGVQEVKAQDEHVAGTFCSSNDLKGHFHYA
QKKGYSGVGLYTREEPSEIITGIGVQEFDDEGRYIEKRFDKPGRKLSLISCYFPSGSSGP
ERQEAKYRFLDAMRPHLAALKGEREFILVADVNIAHKPADLKNWKGNLKNSGFLPEERAW
LDHLFGSGPEHGGLVDVYRQLHSDTTDESYTWWSNRGQAYAKNVGWRLDYHFATPKLAAL
AKSASIYKAQKFSDHAPLTIDYDFAL
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttcatcaccgccaatctgaacggcattcgctccgccgccaccaagggctttttt
gactggttgcccgcgcagcaggccgatgccctgggcgtgcaagaggttaaggcccaggac
gagcatgtggccggtactttttgcagctcgaatgacttgaagggtcacttccactacgcg
cagaaaaagggctactccggcgtgggcctctacacccgcgaggaacccagcgagatcatc
accggcatcggcgtgcaagagtttgacgatgaaggccgctacatcgaaaagcgcttcgac
aaacccggccgcaagctcagcctgatcagctgctacttccccagcggcagcagcggcccc
gagcgccaagaagccaagtaccgattcctcgacgccatgcgcccccacctggccgctttg
aagggcgagcgcgagttcatcctggtggccgacgtcaacatcgcccacaagcccgctgac
ctgaagaactggaagggcaatctgaagaacagcggcttcctgcccgaggaacgcgcctgg
ttggatcatctcttcggcagcggccctgagcacggcggcctggtcgatgtgtaccgccag
ctccattccgacaccaccgacgagagctacacctggtggagcaaccgcggccaggcctat
gccaagaacgtgggctggcgcttggactaccacttcgcgaccccgaagctcgcggccctg
gccaagagtgcctccatctacaaagcgcagaagttcagcgatcacgcgccgctgaccatc
gactacgactttgcgctttga
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