Paucibacter sp. KCTC 42545: AT984_21685
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Entry
AT984_21685 CDS
T04227
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pkt
Paucibacter sp. KCTC 42545
Pathway
pkt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pkt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AT984_21685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkt03400
]
AT984_21685
Enzymes [BR:
pkt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AT984_21685
DNA repair and recombination proteins [BR:
pkt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AT984_21685
Prokaryotic type
AT984_21685
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ALT80087
LinkDB
All DBs
Position
5061247..5061954
Genome browser
AA seq
235 aa
AA seq
DB search
MSRADIADAAAGIDAGWQPVLSAWAASAAGLQCLQFVQARQAVGALIYPPDPWRALRLTP
LRETRVVILGQDPYHGLGQAEGLAFSVPPELNKFPPSLRNIFKELQRDLGLQPPMHGHLG
DWAQRGVLLLNTSLTVEDGAPASHAKQGWEALTDALIQAAAQDPAPKVFMLWGAHAQAKA
ALIAAAGPAHLILQANHPSPLSALRPPLPFIGCGHFSQASAWLQSQRGQGMDWAL
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgggcagacatcgccgatgccgccgctggcattgatgccggctggcagcccgtg
ctcagcgcctgggcggccagtgcggccggcctgcaatgcctgcagtttgtgcaggcgcgc
caagcagttggggcgctgatctatccgcccgacccctggcgggccctgcgcctgacgccg
ctgcgcgagacccgtgtggtgatcctgggtcaagatccgtatcacggcctcggtcaggcc
gagggtttggcgttttcggtgccgcccgagctgaacaagtttccgcccagcctgcgcaat
atcttcaaggaattgcagcgcgacctgggcctgcagccgcccatgcatggccatttgggc
gattgggcgcagcgcggcgtgctcttgctcaacaccagtctgacggtggaagacggcgcg
cccgccagccatgccaagcaaggctgggaggccttgaccgacgccctgattcaagccgcg
gcccaagaccccgcgcccaaggttttcatgctctggggcgcgcatgcccaggccaaggca
gcgctgatcgcggcggcagggcctgcgcatttgatcctgcaagccaatcacccttcgccg
ttgtcggccctgcgcccgcctctgcccttcattggctgcgggcacttttcgcaagcttcg
gcttggctgcaaagccaacgggggcaggggatggactgggctttgtag
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