Planococcus kocurii: AUO94_02905
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Entry
AUO94_02905 CDS
T04200
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pku
Planococcus kocurii
Pathway
pku03420
Nucleotide excision repair
pku03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AUO94_02905
03430 Mismatch repair
AUO94_02905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pku03400
]
AUO94_02905
Enzymes [BR:
pku01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AUO94_02905
DNA repair and recombination proteins [BR:
pku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AUO94_02905
MMR (mismatch excision repair)
Other MMR factors
AUO94_02905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
ResIII
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ALS77656
LinkDB
All DBs
Position
2316239..2318365
Genome browser
AA seq
708 aa
AA seq
DB search
MSQFFERKKQELGVQLNKIQRKAVERTEGPLLLLACPGSGKTTTMIMRIGYLIEEKGISP
QRIKAITFSKASANDMLERYKRFFPTLQPIDFSTIHSLAFQITRDYFSGSRYVMIEGSET
NGLHKKKLLREMYRTENDEPITDDQLEELISFISYVKNKMLPRKQWAKLKEPFPGAIEIL
KTYEAFKENYDVRLVDFDDMLSLAYEALEKDKSLLAKYQGRWDYVMTDESQDTSLIQHAI
VEKIVARHQNLCVVADDDQSIYTWRAAEPTYLLKFRTVYPDAYIMKMERNYRSSQNIVHT
ANEFIKTNKKRHDKNMFTKQPEGDPIVLRRLGSEEAQFKYVMKELKELTDYGDVAILYRN
NSSSTLLMSELERLGIPFYMKDSDNRFFSHWIVEDMLNFMRFSLKPERIDIYSKVASKTN
AYWSGSQLKMLSRMNPTEEHAFDQINLTITLKDYQIKILAEQKKWFAALNGMKPLKVIRT
IRGEMGYDQMLASRAEKFGMKMTYLAQILTTLEQIAEPLESMTAFAKRLKQLEQVTQQAK
KEKTDDMLTLSTFHSSKGLEFERVYMIDLVEGVIPTEEDGETPDSLEEARRLFYVGMTRA
KSHLELISYGSESRFADEVRNLIVPEKRMATPQRTATKTPIKVKVPDNPNAIHSEDVLRE
GVQVRHRVFGAGEIVERDQERISIQFAKERKELMIDICLSYRLLEMIN
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgagccaattctttgaacgtaaaaaacaggaacttggagttcaattaaataaaatacag
cgaaaagcagtagagcgtacagaaggtcctttgctgttgttagcgtgtccggggtctgga
aaaacgactacgatgattatgcgtatcggttacctaatcgaagaaaaagggatatctccg
caacgtatcaaagcgattacatttagtaaggcatctgctaatgatatgctcgagcggtat
aaacgatttttcccaacgctacagccaattgatttttcgactatccatagcttagccttt
caaattacgcgtgattatttttcaggatctcgttacgtcatgatagaaggcagtgagaca
aatggccttcataagaagaaactcctccgtgaaatgtaccgaacggaaaatgatgagcca
attacagatgaccaattagaagagttgatttcttttattagttacgtgaaaaataaaatg
ctgcctaggaaacaatgggcaaaattgaaagaaccttttcctggagcaatcgaaatcctg
aaaacttacgaagcgtttaaagagaactatgacgtaaggttagttgattttgacgatatg
ttgtcgttagcctacgaagcactggagaaagacaaaagtttgcttgcgaagtaccaagga
cgctgggattatgtcatgacagacgaaagtcaggatacttcattgattcaacatgccatt
gtagaaaaaatagtagctcgccatcaaaacctatgtgttgtagctgacgatgaccagtca
atttatacatggagagctgccgaaccgacttatttactgaagtttagaacagtttaccca
gacgcttatattatgaaaatggagcgtaattatcgctcctcccaaaatattgtgcataca
gctaacgaatttatcaaaaccaataaaaagcggcatgacaaaaacatgtttactaagcaa
cctgaaggagaccccatcgttttaaggcgcttaggttcagaagaagcacaatttaagtac
gttatgaaagagctcaaggaattgacagattatggagatgtggcgattttataccgcaac
aactcgtcttcaactttactgatgagtgaacttgaacgtttaggcattcctttctatatg
aaggattctgataatcgttttttctctcattggattgtagaagatatgttaaattttatg
cgttttagcctgaagccagaacgcattgatatttattcgaaagttgcttctaaaacgaat
gcctattggtcagggagccaattgaaaatgctaagtcgcatgaatccgacagaggaacat
gcttttgatcaaatcaatttaacaattaccttaaaagactatcaaattaaaattttagct
gaacagaaaaaatggtttgctgcgttgaatggcatgaagccgttgaaagtgattcgaaca
attcgtggggaaatgggctatgatcaaatgctcgcgagtcgtgccgagaagtttgggatg
aaaatgacatacctggctcagattttgacgacattggagcaaattgcagagccgcttgaa
tccatgacagcttttgcaaaacgcctaaagcagttagaacaagtaacacaacaagcgaaa
aaagagaaaactgacgatatgctaaccttatcaacatttcacagctctaaaggtttggaa
tttgaacgagtttacatgattgacttagtagaaggagtcatcccaactgaagaagatggg
gaaacgcctgacagtttagaagaagcgcgccgcctattttacgttggcatgacaagagct
aaaagccatttagaattgattagttacggaagtgagtctcggtttgcggatgaagtacgc
aacttaatcgttcctgaaaaaagaatggcaacgccacaacgaactgcaacgaaaacacct
atcaaagtaaaagtacccgacaatccgaatgccatccattcagaagatgtattgcgtgaa
ggggttcaggttaggcatcgcgtcttcggagccggggagattgtcgaacgagatcaagaa
cgaatctccatccaattcgcaaaagaacgcaaagaattaatgattgatatctgcctaagt
tatcggttattagagatgattaactag
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