Planococcus kocurii: AUO94_06195
Help
Entry
AUO94_06195 CDS
T04200
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pku
Planococcus kocurii
Brite
KEGG Orthology (KO) [BR:
pku00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pku03032
]
AUO94_06195
03400 DNA repair and recombination proteins [BR:
pku03400
]
AUO94_06195
Enzymes [BR:
pku01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AUO94_06195
DNA replication proteins [BR:
pku03032
]
Prokaryotic type
DNA Topoisomerases
AUO94_06195
DNA repair and recombination proteins [BR:
pku03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AUO94_06195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
DUF2996
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ALS78270
LinkDB
All DBs
Position
3026719..3028788
Genome browser
AA seq
689 aa
AA seq
DB search
MADFLVIVESPAKAKTIERYLGKKYKVRASLGHLRDLPRSQMGVDVENNYEPRYITIRGK
GPILQDLKKEAKKAKKVFLAADPDREGEAIAWHLATALGIDQTSDCRVVFNEITKDAIKE
SFKHPRKIDMDLVDAQQARRILDRLVGYSISPLLWKKVKKGLSAGRVQSVALRLVIDREN
EIKSFEPEEYWSITGEFEKAKKNFEAQFYGNTKEKMKLHNEADVKAVMSSMSGKNFTVNR
VVKKERKRNPSPSFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGISVGKEGITGLITYMR
TDSTRISDTAKKDTMDFIVENYGEEYVTQKAPAKQSAKSQDAHEAVRPTSVMRTPESMKS
ILSRDLYRLYKLIWDRFVASQMSSAVLDTVMAELQNGEAVFRANGSQVKFPGFMKLYIEG
TDDQKEEKDNILPEMAEGDIVKAVDVTPNQHFTQPPPRFTEARLVRALEELGIGRPSTYA
PTLDTIQKRGYVTLDAKRFIPTELGEIVHQLVLEFFPDILNIEFTAKMEHDLDTVEDGEI
EWRTIIDAFYQKFEKNVEVAENEMEKVQIKDEPAGEDCELCGSAMVYKLGRYGKFMACSN
FPECRNTKAIVKHIGVKCPTCKEGEIVERKSKKRRIFYGCERYPECEFVSWDKPIERPCP
KCNELLVEKKVKKGVQINCTSCDYKEEVQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcggattttttagtgattgttgagtcgcctgcaaaggctaagacgatcgaacggtat
ttgggtaagaaatataaagtccgtgcttcacttggacatttacgcgatttgccccggagt
caaatgggtgtagacgtggaaaacaattatgaacctcgatatattacgataagaggtaaa
ggaccaattttgcaagatcttaaaaaagaagcgaaaaaagcgaagaaagtctttctcgcg
gctgaccccgacagagaaggagaagcaattgcatggcatttggcgacggcactcggtatt
gatcaaacttcagattgccgtgtcgtttttaatgaaattaccaaagatgcgattaaggaa
tcatttaagcatccgcgtaaaattgatatggacttagtcgatgcgcaacaagcacgacgg
atattagatcgacttgtcggctacagcatcagcccattactttggaaaaaagtaaaaaaa
ggcttatcagctggacgcgtacaatctgtcgcgttgcgtttagttatcgatcgagaaaat
gaaatcaagagcttcgaaccagaggaatactggtcaatcactggagagttcgaaaaagcg
aagaaaaacttcgaagcgcaattttatggcaacacaaaagaaaaaatgaaattgcataat
gaggctgacgttaaagcggtcatgtcttccatgtcaggaaaaaactttaccgtaaatcgc
gtagtgaaaaaagaaagaaaaagaaacccttctccttcttttacaacttcttcacttcag
caagaagctgctcgtaaattaaacttccgagctaaaaagaccatgatgcttgcacaacag
ctgtatgaaggtatttcagtagggaaagaaggcatcacgggtttgattacgtatatgaga
acggactctacccgaatctcggatacggcaaaaaaagacacaatggactttatcgtcgag
aactacggcgaggaatacgtgacacaaaaagcgccagctaagcagtcagcaaaatcacaa
gacgcccatgaagcggttcgaccgacaagcgtgatgagaacgccagaatcgatgaagagc
attttatcacgtgatctttaccgtctatataaattgatttgggatcgatttgtagcgagc
caaatgtcatcggctgttctagatacagttatggcagagttgcaaaacggtgaagcagtg
ttccgtgcaaatggttctcaggttaagtttcccggttttatgaagctttatattgaaggc
accgatgaccagaaagaagaaaaagataatatactgccggaaatggctgaaggcgatatc
gtgaaagcggtcgacgttacaccaaatcagcattttacgcagccacctccgcgctttaca
gaggctcgcttagtacgagcacttgaagaactaggaattggacgtccatcaacttatgca
ccaactttggataccattcaaaaacgtggctatgttacattagacgctaaacgctttatt
ccaacggagctgggtgaaattgttcatcagctagtgctcgagtttttcccggacatttta
aatatcgaatttacggctaaaatggagcatgatttggatacagtggaagatggcgaaatt
gaatggcgcaccattatcgatgctttttaccagaaattcgaaaaaaatgtcgaagtggca
gaaaatgaaatggaaaaagtacagattaaagatgaaccagctggtgaagattgcgaactg
tgtggttcggcaatggtttataaattgggacgttatggtaagttcatggcttgtagcaat
ttccctgaatgccgaaatacaaaagccatcgtcaagcacattggcgtgaaatgcccaaca
tgtaaagaaggcgaaattgttgaaagaaaaagtaagaagcgccggatattctacggctgc
gaacgttacccagaatgtgaattcgtatcatgggataaaccaattgaacgcccatgtccg
aaatgtaacgagttgctggtagagaaaaaagtgaaaaaaggcgttcaaatcaattgcaca
agctgtgattataaagaagaagttcaataa
DBGET
integrated database retrieval system
