Planococcus kocurii: AUO94_06310
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Entry
AUO94_06310 CDS
T04200
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pku
Planococcus kocurii
Brite
KEGG Orthology (KO) [BR:
pku00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pku03016
]
AUO94_06310 (truB)
Enzymes [BR:
pku01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AUO94_06310 (truB)
Transfer RNA biogenesis [BR:
pku03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AUO94_06310 (truB)
Prokaryotic type
AUO94_06310 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ALS78293
LinkDB
All DBs
Position
3053211..3054140
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AA seq
309 aa
AA seq
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MALNGILPLWKEKGMTSHDCVFKLRKILQTKKVGHTGTLDPEVDGVLPICIGNTTKVAEY
ITDQGKTYEAEVTIGYSTDTEDATGETVETDASEKVITRAQVAEVLLQLTGNIKQIPPMY
SAVKVNGKKLYEYARQGIPVERPERIVSIDSIELLDDDQRWIGEKISFNIRIRCGKGTYI
RTLAVQIGEALGYPAHMSRLTRTESGKFSEKDCVTLAEVAELAQNGHMDDILKPLSYGLS
AFPFLEIEQQQVFAVKNGQVLARHAILDEMGFVALTYKGQPVALYKNHPEKADKMKPEKM
FGFPTADEV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcgctaaatggaattttaccattatggaaagaaaaaggaatgacttcccatgattgt
gtttttaaactcagaaaaattcttcaaacaaaaaaagtaggacataccggcacactagac
cctgaagtggatggggtattgccgatttgtatcggaaacacgaccaaagtggctgaatat
attacggaccaaggcaagacctatgaagctgaagtgacaattggctactcaacagataca
gaagatgctacaggtgaaacagttgagacagatgcttctgaaaaagtgattacgcgagcg
caagtggcagaagttttgctgcagctgaccggtaacattaaacaaattccaccgatgtat
tcagcagtcaaagtaaatggcaaaaaattatacgaatatgcccgtcaaggaattccggtt
gagcgacctgaacgaattgtgagcattgattcgattgaattgcttgatgacgatcagcga
tggatcggtgaaaaaattagctttaatattcgcatccgttgtggcaaaggaacttatatt
cggacattggccgtgcaaattggggaagcgctaggttatcctgcgcatatgtcgagacta
acacgcacagaatcagggaaatttagtgaaaaagattgtgtaacacttgctgaagtggct
gaacttgctcaaaatgggcatatggatgatattttaaaaccgttgagttatggcctaagt
gcgtttccgtttttggaaattgaacagcaacaagtttttgctgtgaaaaatggtcaagtg
ttagcgcgccacgccatactagatgaaatgggttttgtagctttaacctacaaggggcag
ccagtggcactctataaaaatcaccctgaaaaagcggataaaatgaaacctgaaaaaatg
ttcggttttccgacagcagacgaggtgtaa
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