KEGG   Planococcus kocurii: AUO94_06310
Entry
AUO94_06310       CDS       T04200                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
pku  Planococcus kocurii
Brite
KEGG Orthology (KO) [BR:pku00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pku03016]
    AUO94_06310 (truB)
Enzymes [BR:pku01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     AUO94_06310 (truB)
Transfer RNA biogenesis [BR:pku03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    AUO94_06310 (truB)
 Prokaryotic type
    AUO94_06310 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: ALS78293
LinkDB
Position
3053211..3054140
AA seq 309 aa
MALNGILPLWKEKGMTSHDCVFKLRKILQTKKVGHTGTLDPEVDGVLPICIGNTTKVAEY
ITDQGKTYEAEVTIGYSTDTEDATGETVETDASEKVITRAQVAEVLLQLTGNIKQIPPMY
SAVKVNGKKLYEYARQGIPVERPERIVSIDSIELLDDDQRWIGEKISFNIRIRCGKGTYI
RTLAVQIGEALGYPAHMSRLTRTESGKFSEKDCVTLAEVAELAQNGHMDDILKPLSYGLS
AFPFLEIEQQQVFAVKNGQVLARHAILDEMGFVALTYKGQPVALYKNHPEKADKMKPEKM
FGFPTADEV
NT seq 930 nt   +upstreamnt  +downstreamnt
atggcgctaaatggaattttaccattatggaaagaaaaaggaatgacttcccatgattgt
gtttttaaactcagaaaaattcttcaaacaaaaaaagtaggacataccggcacactagac
cctgaagtggatggggtattgccgatttgtatcggaaacacgaccaaagtggctgaatat
attacggaccaaggcaagacctatgaagctgaagtgacaattggctactcaacagataca
gaagatgctacaggtgaaacagttgagacagatgcttctgaaaaagtgattacgcgagcg
caagtggcagaagttttgctgcagctgaccggtaacattaaacaaattccaccgatgtat
tcagcagtcaaagtaaatggcaaaaaattatacgaatatgcccgtcaaggaattccggtt
gagcgacctgaacgaattgtgagcattgattcgattgaattgcttgatgacgatcagcga
tggatcggtgaaaaaattagctttaatattcgcatccgttgtggcaaaggaacttatatt
cggacattggccgtgcaaattggggaagcgctaggttatcctgcgcatatgtcgagacta
acacgcacagaatcagggaaatttagtgaaaaagattgtgtaacacttgctgaagtggct
gaacttgctcaaaatgggcatatggatgatattttaaaaccgttgagttatggcctaagt
gcgtttccgtttttggaaattgaacagcaacaagtttttgctgtgaaaaatggtcaagtg
ttagcgcgccacgccatactagatgaaatgggttttgtagctttaacctacaaggggcag
ccagtggcactctataaaaatcaccctgaaaaagcggataaaatgaaacctgaaaaaatg
ttcggttttccgacagcagacgaggtgtaa

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