Planococcus kocurii: AUO94_09560
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Entry
AUO94_09560 CDS
T04200
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
pku
Planococcus kocurii
Pathway
pku03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AUO94_09560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pku03400
]
AUO94_09560
Enzymes [BR:
pku01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
AUO94_09560
DNA repair and recombination proteins [BR:
pku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AUO94_09560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
AcMNPV_Orf101
Motif
Other DBs
NCBI-ProteinID:
ALS78884
UniProt:
A0ABN4JYP0
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All DBs
Position
complement(238772..239665)
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AA seq
297 aa
AA seq
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MLLGSHVSMSGKKMLLGASEEAASYGATTFMIYTGAPQNTRRKPIEELNIDAGFAHMAAN
NLTNIVVHAPYIINLGNTQKPETFELGVEFLQKEIERTAALGAKQIVLHPGAHVGAGADA
GIAKIIEGLNEVLTQDYPVNIALETMAGKGTECGRSFEEIAAIINGVTHNERLSVCFDTC
HTHDAGYNIKEDFNGVLEEFDRIVGVDRLQVLHINDSKNVRGASKDRHENIGFGEIGFDA
LNGIVHHPDLMHVPKILETPYVGLDAKNKKAPYAFEIEMFRAGIFSPGVIEELKSPL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgttactaggatctcacgtctcgatgagcggtaagaaaatgctacttggcgcaagcgaa
gaagcggcttcttacggagctacaacttttatgatttataccggtgcacctcaaaacaca
cgtcgcaagccaattgaagaattgaatatcgacgcaggttttgcgcatatggctgccaat
aatttaacgaatattgtggttcatgccccgtatattatcaatttaggcaatacccaaaag
cctgaaaccttcgaactgggcgtggaatttcttcaaaaagaaattgaacgcactgcagca
ctgggtgcaaaacaaattgtcttgcacccaggtgctcacgtcggagctggagcagatgcc
ggtattgctaaaattatcgaaggtttgaatgaggtattaacgcaggattatccagtcaat
atcgcacttgagacgatggctggtaaaggcacagaatgtggtcgcagttttgaggaaatt
gctgcaatcattaatggtgtgacacataacgaacgcctatctgtatgctttgatacgtgt
catacacatgatgccggctataacatcaaagaagattttaacggcgtattagaagagttc
gaccgtattgttggggtcgaccgccttcaagtactgcacatcaatgacagtaaaaatgtt
cgaggcgcaagtaaagaccgccacgaaaacattggctttggtgaaatcggatttgatgcg
ttaaatggcattgttcatcatcctgatttgatgcacgtccctaaaatccttgaaacgcct
tacgtcggattagatgctaaaaataaaaaagcaccatatgcatttgaaattgaaatgttt
agggcgggtatcttttcaccaggcgtgatcgaggaattgaaatctcctttataa
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