KEGG   Planococcus kocurii: AUO94_09615
Entry
AUO94_09615       CDS       T04200                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03086  RNA polymerase primary sigma factor
Organism
pku  Planococcus kocurii
Pathway
pku02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:pku00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AUO94_09615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pku03021]
    AUO94_09615
Transcription machinery [BR:pku03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AUO94_09615
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r1_1 Exonuc_VII_L DUF2408 Drf_FH3
Other DBs
NCBI-ProteinID: ALS78895
LinkDB
Position
complement(250183..251337)
AA seq 384 aa
MAEKSERQTEVEASNVPLTTEGPEATVEEAKKQLIETGKKTGELNYEQIADKLAVFEMES
DAVEEFIDQLEGHGIELERKSDDEEHLDRLMKPTEDKFDLNDLSVPPGVKINDPVRMYLK
EIGRVDLLKAEEEVRLAKLIEQGDEEAKKRLAEANLRLVVSIAKRYVGRGMLFLDLIQEG
NMGLIKAVEKFDYSKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQR
QLLQDLGRDPSPEEIGEEMDLLPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDSDA
QSPSDHAAYELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIR
QIEAKALRKLRHPSRSKRLKDFLE
NT seq 1155 nt   +upstreamnt  +downstreamnt
atggccgagaaatctgaacgccaaactgaagttgaagcaagcaatgttccattgactact
gaaggtccggaagcgactgtggaagaagcaaaaaaacagctaatcgaaacaggtaaaaaa
accggagaactcaattacgaacaaattgctgataaattagcggttttcgaaatggaatcc
gatgcagtagaagagtttattgaccaactagaaggtcacggtatcgaattagaacgtaaa
tctgatgatgaagaacatttggatcgtttgatgaaaccgacagaagataaattcgattta
aatgatttaagcgtaccacctggtgttaaaatcaatgaccctgtccgcatgtatttgaaa
gaaatcggacgcgttgatctgctaaaagcagaagaagaagttcgcttagcgaaattgatt
gaacaaggtgacgaagaagctaaaaaacgtcttgctgaagccaacttgcgtctagttgtg
agtatcgcaaaacgctatgttggtcgcggcatgttgtttttggacttgattcaagaaggt
aacatgggcttgatcaaagcagtagaaaaatttgattactctaaaggatttaagttcagt
acgtatgcaacatggtggattcgtcaggctattacccgtgccatcgcggaccaagcgcgg
accattcgtattccggttcatatggttgaaaccattaacaaattgattcgtgttcaacgt
caattgttgcaagatcttggtcgtgatccttctccagaagaaatcggcgaagaaatggat
ttattaccagaaaaagttcgggaaatcttgaaaattgctcaagaaccggtatcattagaa
acaccaatcggtgaagaagatgattcgcatttaggtgactttatcgaggattcagatgcc
caatcgccttctgatcatgcagcttatgaattattaaaagagcagttagaggatgtttta
gacacattaacggatcgagaagaaaacgtcttacgtcttcgcttcggcttagatgacggt
cgtacacggacgttagaagaggtaggcaaagtatttggcgtaacgcgtgagcgaattcgt
caaatcgaagcaaaagctttgcgcaaactgcgccacccatcgcgcagcaagcggttaaaa
gattttcttgaataa

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