Planococcus kocurii: AUO94_09615
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Entry
AUO94_09615 CDS
T04200
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
pku
Planococcus kocurii
Pathway
pku02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pku00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AUO94_09615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pku03021
]
AUO94_09615
Transcription machinery [BR:
pku03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AUO94_09615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
DUF2408
Drf_FH3
Motif
Other DBs
NCBI-ProteinID:
ALS78895
LinkDB
All DBs
Position
complement(250183..251337)
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AA seq
384 aa
AA seq
DB search
MAEKSERQTEVEASNVPLTTEGPEATVEEAKKQLIETGKKTGELNYEQIADKLAVFEMES
DAVEEFIDQLEGHGIELERKSDDEEHLDRLMKPTEDKFDLNDLSVPPGVKINDPVRMYLK
EIGRVDLLKAEEEVRLAKLIEQGDEEAKKRLAEANLRLVVSIAKRYVGRGMLFLDLIQEG
NMGLIKAVEKFDYSKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQR
QLLQDLGRDPSPEEIGEEMDLLPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDSDA
QSPSDHAAYELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIR
QIEAKALRKLRHPSRSKRLKDFLE
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaaatctgaacgccaaactgaagttgaagcaagcaatgttccattgactact
gaaggtccggaagcgactgtggaagaagcaaaaaaacagctaatcgaaacaggtaaaaaa
accggagaactcaattacgaacaaattgctgataaattagcggttttcgaaatggaatcc
gatgcagtagaagagtttattgaccaactagaaggtcacggtatcgaattagaacgtaaa
tctgatgatgaagaacatttggatcgtttgatgaaaccgacagaagataaattcgattta
aatgatttaagcgtaccacctggtgttaaaatcaatgaccctgtccgcatgtatttgaaa
gaaatcggacgcgttgatctgctaaaagcagaagaagaagttcgcttagcgaaattgatt
gaacaaggtgacgaagaagctaaaaaacgtcttgctgaagccaacttgcgtctagttgtg
agtatcgcaaaacgctatgttggtcgcggcatgttgtttttggacttgattcaagaaggt
aacatgggcttgatcaaagcagtagaaaaatttgattactctaaaggatttaagttcagt
acgtatgcaacatggtggattcgtcaggctattacccgtgccatcgcggaccaagcgcgg
accattcgtattccggttcatatggttgaaaccattaacaaattgattcgtgttcaacgt
caattgttgcaagatcttggtcgtgatccttctccagaagaaatcggcgaagaaatggat
ttattaccagaaaaagttcgggaaatcttgaaaattgctcaagaaccggtatcattagaa
acaccaatcggtgaagaagatgattcgcatttaggtgactttatcgaggattcagatgcc
caatcgccttctgatcatgcagcttatgaattattaaaagagcagttagaggatgtttta
gacacattaacggatcgagaagaaaacgtcttacgtcttcgcttcggcttagatgacggt
cgtacacggacgttagaagaggtaggcaaagtatttggcgtaacgcgtgagcgaattcgt
caaatcgaagcaaaagctttgcgcaaactgcgccacccatcgcgcagcaagcggttaaaa
gattttcttgaataa
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