Planococcus kocurii: AUO94_10555
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Entry
AUO94_10555 CDS
T04200
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pku
Planococcus kocurii
Pathway
pku03030
DNA replication
pku03430
Mismatch repair
pku03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AUO94_10555
03430 Mismatch repair
AUO94_10555
03440 Homologous recombination
AUO94_10555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pku03032
]
AUO94_10555
03400 DNA repair and recombination proteins [BR:
pku03400
]
AUO94_10555
Enzymes [BR:
pku01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AUO94_10555
DNA replication proteins [BR:
pku03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AUO94_10555
DNA repair and recombination proteins [BR:
pku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AUO94_10555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
MamS_MamX
Motif
Other DBs
NCBI-ProteinID:
ALS79074
UniProt:
A0ABM5WXK0
LinkDB
All DBs
Position
complement(442625..445687)
Genome browser
AA seq
1020 aa
AA seq
DB search
MSMVYPHISTSADLLKSTVRLDELFPYLKEQGATSVAIVNTKLYGILPFWEECRRADIHG
VIGLSVFIEYEEQHYPIILYAQTNKGYGNLLKISSALSTRDKEAIPEQWLKAYKEGLICV
IPNKAEWLLADRSQVFQFVKDLFGVCAFGSLERPGGVKSQYESTFIELCDTIQLPIIATH
ESRYLREQDAFAYEVASAIGQGLKMNDPQRHEPEHTSAYIPSPKELESWFVDHPEWLLRT
TELMASCHVTIPMNQQLLPVFPVDEKVDKATFIAELCKLGLAERKVGFSEIYQQRLDYEL
SVIAKMGFIDYFLIVADFMKYARDQDILTGPGRGSSASSLVAYSLKITDVDPIEHGLLFE
RFLNPERVTLPDIDIDFADHRRHEVVDYVAKKYGAIRTAQIITFGTLSAKAVARDTARVF
GFEAEELEAISKMIPNRPGTTLRSALKESTAFNDWIIEKEERKSWFKTALKLEGLPRHAS
THAAGVILSPTPLVDHVPIEKGHEGIYLTQWPMQELEAIGLLKMDFLGLRNLTILEQIRN
LVYWDTKKRIDYRSLPLEDAKTYQLLAKGDTTGIFQLESDGMRRALQQIKPTAFGDIVAV
NALFRPGPMEFIPLYARRKHGQESVKYVHPILEPILSETYGVIVYQEQIMHIAAKMAGFS
LGQADLLRRAVSKKKREILDEQRAHFVRGAKAKNFTEAEAAEVYDLIVRFADYGFPKSHA
VAYSIISYQLSYMKTHYPVYFYTGMLTNSAGNVDKTKQLMQEIKEKNIPLLSPSIQKSRH
SFSVEAGEIRIGLNVVKGVPGTTIKALLAARESGPFSSLFNIAERISALHFNRKSFEPLI
KAGALDEFGYDRGVLLASLDSAIKHAELVKPTEDPGLFDDMGSSFMKPKYTKATDMPETL
KLDYEKEVLGFYLSKHPIEREKENRQKTYQDLKSLKNKRDRESVTVLGMVEDVKRIRTKK
GDAMAFVTLMDDTGPASVTLFPVEYAKYTPLLELHAVLEIQGIVENRNQKTAIICKTIET
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaatggtttatccgcatataagcacatcagccgatttgctgaaaagcacggtgcgc
cttgacgaacttttcccttatttaaaggaacaaggagccacatcagtcgcaatcgttaat
acaaaattgtatggcattttaccgttttgggaagaatgtcgtcgtgcagatattcacgga
gtaattggtttatcagtttttatcgaatacgaagagcagcattatccaatcattttgtat
gcccagaccaataaaggttatggcaacttactgaaaatctccagtgctctttcgacgaga
gacaaagaggcaatacctgaacaatggttaaaagcttataaagaaggcttgatttgtgtc
attccaaacaaagcagagtggctattagctgatcgaagtcaggttttccaatttgtaaaa
gacttgtttggtgtttgcgcttttggaagtcttgaacgtccaggtggtgttaagtctcaa
tacgagtcgacgtttattgaattgtgcgacaccatccaattacccattatcgcaacacac
gaaagtcgttatttgcgtgagcaagatgcatttgcttatgaagtggcatctgcgattggt
caagggctaaagatgaacgatccgcaaaggcatgaaccggagcacacgagtgcctatatt
ccaagccctaaagaattggaatcttggtttgtagatcatccggaatggctcttgcgtaca
acagaactgatggcaagttgtcacgtaacaattccaatgaatcagcaattgctgccggtt
tttcctgtggatgaaaaagttgacaaagcgacttttattgcggagctatgcaaattgggg
ttagctgaacggaaagtcggattttcagaaatttatcagcagcgtttagactacgaatta
tcggtcatcgctaagatgggctttatcgattatttcttgattgttgcagattttatgaaa
tatgccagagatcaagatattttaacaggtcctggacgtggctcttcggcaagttcactt
gttgcgtattcgctgaaaattaccgatgttgatccgattgaacatgggttgttatttgaa
cgtttcttgaatccagagcgagttacgctgccagacattgatatcgattttgctgatcac
aggcgccacgaagtggtcgactatgtagcgaaaaaatacggtgccattcgcacggcgcag
attattacattcggcaccttatcagcgaaagccgttgcacgtgatactgcccgtgtgttt
ggttttgaagcagaagaactcgaagccatttcaaaaatgattccaaatcgtccaggaacg
acattgcgttcagctcttaaagagtctactgcatttaacgattggattattgaaaaagaa
gaacgcaaatcttggtttaaaaccgcgttaaaattagaaggcctgccacgccatgcttcg
acacatgcagcaggtgtgattttaagcccgacgcctctagtggaccacgtgcccattgaa
aaaggtcatgaaggaatctatttgacgcaatggccaatgcaagaactcgaagccatcggt
ttgttgaaaatggattttcttggtttgcgtaatttaaccatattagaacaaatccgtaac
ttggtttattgggataccaaaaagcgaatcgattatagaagccttccactagaagacgct
aaaacctatcaactgctggccaagggcgatacgactggcattttccaattagagtctgac
ggcatgcggcgtgcgctacaacaaatcaaaccaacggcttttggtgatattgttgctgtc
aatgccttgttccgaccaggtccaatggaatttatccctctatatgcgagacggaaacac
ggacaggaatctgttaaatacgttcatccgattcttgaaccaattttgagcgaaacatac
ggcgtcatcgtctaccaagaacagattatgcacattgccgcgaaaatggctggattttct
cttggacaagccgatctattacgtcgcgctgtcagtaagaaaaaaagagaaattctagat
gaacagcgtgcacactttgtccgaggggcaaaagccaaaaattttacagaagcagaagcg
gcagaagtttatgatttgattgttcgttttgccgattacggttttccaaaaagtcatgcg
gttgcttatagcataatttcttatcaactaagctatatgaaaacccattatccagtctat
ttctataccggaatgttgaccaacagtgcgggtaatgtcgataaaacaaaacaattaatg
caagaaatcaaagaaaagaacatcccgttgttgtcaccatctattcaaaaaagtcgtcat
tcgttttctgtagaagctggcgaaatacgaatcggtttgaatgtagtaaaaggagttcca
ggtacgactattaaagcgttactggctgctagagaaagtggaccgtttagtagtttgttt
aatattgccgaacgtatttcggctttgcattttaaccgtaaatcatttgagccactcatt
aaagcaggtgctctggatgaatttggttatgaccgtggagtgttactggcgtcgcttgat
agtgccattaagcatgctgaactcgttaagccaacagaagatcctggcttgtttgatgat
atgggctctagcttcatgaaaccgaaatacacgaaggctacagatatgcctgaaacgcta
aagcttgactatgaaaaagaagttcttggtttttacttgtcgaagcatccgattgaacgt
gagaaagaaaatcgtcaaaaaacctatcaagatctgaaatcgctgaaaaacaaacgggat
agggaatcggtaacggttttaggtatggtagaagatgtcaaacggattcgtacaaaaaaa
ggagatgctatggcatttgtcactttaatggacgatacgggtccagcttccgttacgttg
tttccagtggaatacgctaaatacactcctcttttggaactccatgctgtactcgaaatt
caaggtatagtcgaaaatcgtaatcagaaaacggctattatctgtaaaacaatagaaact
tga
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