Planococcus kocurii: AUO94_11745
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Entry
AUO94_11745 CDS
T04200
Name
(GenBank) ABC-ATPase UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pku
Planococcus kocurii
Pathway
pku03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AUO94_11745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pku03400
]
AUO94_11745
DNA repair and recombination proteins [BR:
pku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AUO94_11745
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AUO94_11745
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_21
RsgA_GTPase
AAA_16
nSTAND1
AAA_33
AAA_25
nSTAND3
AAA_22
AAA_23
Viral_helicase1
DnaJ_CXXCXGXG
cobW
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
ALS79275
UniProt:
A0ABM5WY52
LinkDB
All DBs
Position
complement(662300..665182)
Genome browser
AA seq
960 aa
AA seq
DB search
MRNQEIRIQGARANNLKNIDVVIPRDKLVVMTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDLIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYMRLMYARIGKP
ICPNHGIEISSQTIEQMVDRIVEYPERTKMQILAPIVSGRKGTHVKLLEDIKKQGYVRVR
VDGELIDLDDDIALDKNKKHNIEVVIDRIIIKEGIAPRLSDSLESALRLAEGRVLVDVME
QEELLFSEHHACPICGFSIGELEPRMFSFNSPFGACPECDGLGIKLEVDPELVIPDWTAT
LNKGAIVPWQPTSSQYYPQLLKAVCQHYKIDMDIPVSELPEEHINIILRGSGNDKIRFRY
ENDYGQIRDNHINFEGVLSNVDRRYRETSSDYIRDQMEKYMGQQSCTVCEGYRLKPESLS
VKVNGLHIGTVAEFSIVEANQFFDQLVLSEKDMQIAKLILREIQERIGFLINVGLDYLTL
SRASGTLSGGEAQRIRLATQIGSRLTGVLYILDEPSIGLHQRDNDRLIETLKSMRDIGNT
LIVVEHDEDTMLAADYLIDVGPGAGAHGGEIIAAGTPEKVMKNKKSLTGQYLSGKKFIPV
PAERRVPSDRKISIRGANQNNLKKVDVDIPLGLFTAVTGVSGSGKSTLINEILYKTLAHR
LNRAKAKPGHFDLIEGTEELEKVIDIDQSPIGRTPRSNPATYTGVFDDIRDVYATTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEICHGKRYNRETLEVKYKN
KSIADVLAMTVEDGYAFFENIPKINRKLKTIVDVGLGYIKLGQPATTLSGGEAQRVKLAS
ELHKRSNGKSFYILDEPTTGLHADDISRLLVVLQRLVENGDTVLTIEHNLDVIKTADYII
DLGPEGGDKGGMILATGTPEEIAAVENSYTGKYLKPVLERDRARMDAVVKGASRKKKTVK
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
ttgagaaatcaggaaatacggatacaaggcgcgcgtgcaaataatctaaaaaacattgat
gtggtgattccacgtgacaagcttgtggttatgactggactgtcaggatccggtaaatct
tcgcttgcatttgatacgatttatgcggaaggacagcggcgatatgttgaatcgttgtct
gcttatgcacgccagtttttaggacaaatggataagcctgacgttgatttaattgaagga
ttgtcaccggctatttcgattgatcaaaagaccacgagtaaaaatccgcgttctacagta
gcgacagttacggaaatctatgattacatgcggctcatgtatgcacggattggtaagccg
atttgtccaaatcatggtatagaaatttcttctcaaaccattgaacaaatggtagatcgc
atcgtggaatacccggaacgtaccaaaatgcaaattttagctccaattgtttctggtcga
aaaggaactcacgtcaagttacttgaggacattaaaaagcaagggtatgtccgggtgcgc
gtggacggggaactaattgatctcgatgacgacattgcactagataaaaataaaaagcac
aacattgaagttgttattgatcgcatcatcattaaagagggcattgcgccacgtctaagt
gattctttagaatcagcccttcggctagcagaaggccgtgttttagtagatgtgatggag
caagaagaattgctgtttagtgagcatcatgcctgcccgatttgtggattttctattggt
gagcttgaaccgagaatgttttcgtttaactcaccttttggtgcatgtccagaatgcgac
ggtttagggataaagctagaagttgatcctgaattggtcattccagattggactgccacg
ttgaacaaaggagcaattgttccttggcaaccaaccagttcgcaatattatccgcaactt
ctaaaagcggtttgtcagcattataaaattgatatggacattccagtaagtgaattgcca
gaagagcatattaacattattttacgcggttctggaaacgataaaattcgtttccgttat
gaaaatgactatggtcaaattcgagacaatcacattaattttgaaggtgtcctttccaat
gtggaccgtcgttatcgtgagacatcttcagattatatccgtgaccaaatggaaaaatac
atgggtcagcaaagttgcacagtttgtgaaggctatcgtctaaagcctgaatcgctgtca
gtgaaagtaaatggtcttcatatcggaaccgtcgctgaattttcgattgtcgaagccaat
cagtttttcgatcagctcgtattgtcagaaaaagatatgcaaattgccaaactgatttta
cgggaaattcaagaacgcattggttttttgatcaatgttggactggattacttaacgtta
agtcgtgcatcgggaactttatccggaggagaggcgcagcgaatccgcctagcaactcaa
atcggatcaagacttaccggtgtactttatatactcgatgaaccatccataggtcttcat
caacgagataatgatcgattgattgagactttgaaaagtatgcgagatattggcaatacc
ttaattgtcgtagagcacgacgaagatacgatgttagctgctgattatttgattgatgtt
ggaccgggagcaggagcgcatggtggagaaattattgctgcaggaacacctgaaaaagta
atgaaaaataaaaaatcattaacgggtcaatacttaagcggcaagaaatttattcccgtg
cctgctgagcgaagagtaccaagcgaccggaaaatctcaatccgcggtgcgaatcaaaac
aacttgaaaaaagtagatgtcgatattccactcggtttatttacagcagtgactggggtt
tcaggatcaggtaaaagtacgctcattaacgaaattctgtacaaaacattggctcataga
ttgaatcgtgcgaaagccaaaccaggacattttgatctaattgaaggaactgaagaattg
gaaaaagttatcgatattgaccagtccccaattggtcggacgccacgttcaaacccagca
acctacacaggtgttttcgatgatatccgtgatgtttacgccacaacgaacgaagcaaaa
gttcgtggctacaaaaaaggccggtttagtttcaacgtcaagggcggtcgctgtgaagct
tgccgtggagatggtattataaaaatagaaatgcatttcctaccggatgtctatgtgccg
tgcgaaatttgccatggtaaacgttacaaccgggaaacattggaagtgaagtataaaaac
aaaagcattgcggatgttcttgcgatgacagtggaagatggctacgcattttttgaaaac
attccaaagatcaatcgcaagctaaagacgattgtcgatgtagggttggggtatattaag
cttggccaacctgcgactaccttatccggcggagaagcgcagcgcgttaagttagcatct
gagcttcacaaacgttcaaatggtaagtccttttacattctggacgaaccgactacaggt
ctgcatgcagatgatatttctcggttattggtcgttctgcagcggcttgtagaaaatggc
gatacagtactgactattgaacataatttagatgtcattaagactgcggattatattatc
gatttaggtcccgaaggtggagataaaggcggcatgatcttagctacaggtactcccgag
gaaatcgccgctgttgaaaattcttataccggaaagtacttgaaaccagtactggagcgc
gaccgggcacgtatggatgctgtcgtcaaaggtgcaagtcgcaagaaaaaaacagttaaa
tga
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