Planococcus kocurii: AUO94_12515
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Entry
AUO94_12515 CDS
T04200
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pku
Planococcus kocurii
Pathway
pku03420
Nucleotide excision repair
pku03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AUO94_12515
03430 Mismatch repair
AUO94_12515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pku03400
]
AUO94_12515
Enzymes [BR:
pku01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AUO94_12515
DNA repair and recombination proteins [BR:
pku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AUO94_12515
MMR (mismatch excision repair)
Other MMR factors
AUO94_12515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
HHH_3
AAA_22
Terminase_6N
FWWh
Motif
Other DBs
NCBI-ProteinID:
ALS79400
LinkDB
All DBs
Position
complement(811821..814034)
Genome browser
AA seq
737 aa
AA seq
DB search
MELITKSLLNGMNPEQAEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLVLEKQVYPSNIL
AITFTNKAAREMRNRIDGLLGHGTGQRMWASTFHSMCVRILRRDIDKLGMSKSFSILDTT
DQLTVIKNVLKQQNLDPKKYEPRTMLNAISSSKNECIDASQFAADMNQFNPYEKTVSDVY
TAYEKRLKKNQSLDFDDLIMTTLNLFNTVPEVLEYYQNKFHYIHVDEYQDTNNAQYQLVQ
KLASKFKNICVVGDSDQSIYRWRGADITNILSFEKDYPNAKVIMLEQNYRSTKRILQAAN
DVIQKNTSRYPKELRTDNDEGPAITLHKAGDERQEAQFVVQTIQRLMEEEQYKTSDFAIL
YRTNAQSRIMEEMFVKSNMSYTIVGGTKFYDRKEIKDLLAYLRLIANNDDDLSLARVINE
PKRGIGATSFEKMARFAIEQDRTIMDALQEADFMGLTPKTAQTALEFRAMIDSFTQMQEY
LSVTELVEEILKKSGYRQMLQNDKTIEGESRLENLEEFLSVTKAFEKQSDDKSLVAFLTD
LALISDIDSLDDEEDADGPIILMTMHAAKGLEFPVVFIIGLEENVFPHSRSNNDDEELEE
ERRLAYVGITRAEQRLYLTHASSRTLFGKSNFNMPSRFISEISEELIEQTRAHHRAGAAT
SYRQVPKRPAVTRPSYNQSGSEKLGWKTGDKATHKKWGTGTVVSVKGEGEQTELDIAFPS
PVGIKRLLAKFAPIEKV
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggaattgataacaaaaagtttactaaacggaatgaatccggaacaagcagaagcagtc
aaaacgacagaaggtcctctactaatcatggcaggtgcgggatcaggtaaaacacgtgta
ttgacgcaccgtattgcttatttggtgctggaaaagcaagtgtatccatctaatatttta
gccattacgtttaccaataaagcagcgcgtgaaatgcgtaaccggattgatggcttatta
gggcatggaaccggacaacgcatgtgggcttctacgttccactcaatgtgtgtacgtata
ttgagacgcgatatcgataagttaggaatgtcgaaaagtttttcgattttagatacgaca
gaccaattgacggttattaaaaatgtcttaaaacaacaaaatttagatccgaaaaaatac
gaaccgcgaacaatgttaaatgcgatttcatcttcaaaaaacgaatgcattgatgcatcg
cagtttgcagcggacatgaatcaatttaatccgtacgaaaaaacagtatcggatgtttat
acagcatatgaaaaacgcttgaagaaaaatcagtcactggattttgatgatttgattatg
acgacgttgaatttgtttaataccgttcctgaagtattggaatactatcaaaataaattc
cattatatccatgtagatgaataccaagacacgaacaacgcccagtatcagctggttcaa
aaattagcgagcaaatttaaaaatatttgtgtggttggcgattcagatcagtcgatttat
cgctggcgtggagcggatatcacgaacattttgtcgtttgagaaagattatccaaatgcg
aaagtcattatgcttgagcaaaattatcgctcgacaaagcgtattttgcaggcagctaat
gacgtgattcaaaaaaacaccagccgctatccgaaagaattgcggactgataacgacgaa
ggtccagcaatcactttgcataaagcaggagatgagcgacaggaagcacaatttgttgtt
caaacgatccagcggttaatggaggaagaacaatacaaaacttctgattttgcgattttg
taccgtacgaatgcgcagtcacgaattatggaggagatgttcgttaaatcgaatatgtct
tataccatcgttggcggaacaaagttctacgatcgtaaagaaattaaagatttactggcg
tatttgcgcttgatcgccaacaacgacgatgatttgtctttagctcgtgtcatcaacgaa
ccaaagcgtggaattggtgcaacttcattcgagaaaatggcacgttttgcgattgaacaa
gatcgtacgattatggatgcattgcaagaagctgactttatggggttaacaccgaagacg
gcacagacagctttggaattccgcgcgatgatcgatagttttacgcaaatgcaagagtat
ttatccgtaacggaactggtagaagaaatactgaagaaatcgggctaccgccaaatgttg
caaaacgataaaaccatagaaggcgaaagccgtttagaaaacttggaagagtttttatca
gtcacgaaagcttttgaaaagcaaagtgacgacaaatcattagtcgctttcttaaccgat
ttagcattgatttcggatatcgattcattagatgacgaagaagatgcagatggcccgatt
attttaatgacgatgcacgcagcaaaaggattggagtttcctgtcgtattcatcattgga
ctggaagaaaacgtctttccgcattcacgatcgaataacgacgacgaagaattagaagaa
gaacgtcgtcttgcttacgtaggaattacgcgtgcggaacagcgattgtatttgacgcat
gcgtcttcacgcacattgtttgggaaaagtaatttcaatatgccttcacggtttatttcg
gagatttcagaagagctgattgaacaaacacgagcgcaccatcgtgctggtgctgcaacc
agttatcgacaagtaccgaaacgacccgctgtaacgcgtcctagctataatcagtcaggc
agtgaaaagttgggttggaaaacgggcgataaagcaacgcataaaaaatggggtaccgga
acggtcgttagcgttaaaggcgaaggcgaacaaaccgaacttgatattgcctttccaagt
cctgtcggcattaaacgtttattggcgaaatttgcgccgattgaaaaagtataa
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