Planococcus kocurii: AUO94_15895
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Entry
AUO94_15895 CDS
T04200
Name
(GenBank) RNA polymerase subunit sigma
KO
K02405
RNA polymerase sigma factor FliA
Organism
pku
Planococcus kocurii
Pathway
pku02020
Two-component system
pku02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pku00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AUO94_15895
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AUO94_15895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pku03021
]
AUO94_15895
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pku02035
]
AUO94_15895
Transcription machinery [BR:
pku03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AUO94_15895
Bacterial motility proteins [BR:
pku02035
]
Flagellar system
Flagellar assembly proteins
Stator
AUO94_15895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_5
Rv2175c_wHTH
HTH_23
PhyR_sigma-like
HTH_10
Sigma70_ECF
CT_C_D
HTH_28
DUF4609
DUF7804
Motif
Other DBs
NCBI-ProteinID:
ALS80379
UniProt:
A0ABN4K307
LinkDB
All DBs
Position
complement(1537293..1538051)
Genome browser
AA seq
252 aa
AA seq
DB search
MLNPKLSKEELSCWSDWQQHQDPEAGEYLVEQYLPLVDYVIQRFMISLPKTVEKDDVRSY
AYEGLLDALSKFDIERDLKFETYASWRIKGAIIDGLRHSDWLPRSVREKVKKIEKAYLLL
EQQNSASVSDEEVSLYLGITKAELNKTVSEAALSTMISMDDEHFEERRTVKNHHVGSPER
HLSDRMMKESLVRAIERLPEKEKITVSLCYFEEMKLTEIAEILGVSVSRVSQLHSKAMLR
LHASILSVHDHY
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatcccaaattatcaaaagaagaactctcctgctggagcgattggcaacaacac
caagatccagaagctggcgaatacttggttgaacaatatcttcctttggttgattacgtg
attcaacggttcatgatcagtttaccgaaaactgtggaaaaagatgatgtccgcagctat
gcctatgaaggattactcgatgccttaagtaaattcgatatcgaaagagatttgaaattt
gaaacctatgcttcctggcgcatcaaaggcgcgattattgacgggttgcgacatagtgat
tggttgccgcgatccgttagagaaaaagtaaagaaaattgaaaaagcctatcttttatta
gagcagcaaaatagcgcttctgtgtctgacgaggaagttagtttgtatttgggtattacg
aaagctgagcttaataagacagtttcagaagcagcgctatcaacaatgatttcaatggat
gacgaacactttgaagaacgacgaacagtgaaaaaccatcacgtaggctcgccagaacgc
catttatcagatcgaatgatgaaagaatcgctagttcgtgccattgaacggttgcctgaa
aaagaaaaaattacggtgtcattatgctattttgaagaaatgaaattaaccgaaattgcc
gaaattctcggcgttagtgtatcaagagtttcacagcttcactcaaaagctatgcttcga
ctgcatgcttcgattttatctgtacacgatcattattga
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