KEGG   Planococcus kocurii: AUO94_15895
Entry
AUO94_15895       CDS       T04200                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K02405  RNA polymerase sigma factor FliA
Organism
pku  Planococcus kocurii
Pathway
pku02020  Two-component system
pku02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:pku00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AUO94_15895
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AUO94_15895
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pku03021]
    AUO94_15895
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:pku02035]
    AUO94_15895
Transcription machinery [BR:pku03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AUO94_15895
Bacterial motility proteins [BR:pku02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    AUO94_15895
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 HTH_5 Rv2175c_wHTH HTH_23 PhyR_sigma-like HTH_10 Sigma70_ECF CT_C_D HTH_28 DUF4609 DUF7804
Other DBs
NCBI-ProteinID: ALS80379
UniProt: A0ABN4K307
LinkDB
Position
complement(1537293..1538051)
AA seq 252 aa
MLNPKLSKEELSCWSDWQQHQDPEAGEYLVEQYLPLVDYVIQRFMISLPKTVEKDDVRSY
AYEGLLDALSKFDIERDLKFETYASWRIKGAIIDGLRHSDWLPRSVREKVKKIEKAYLLL
EQQNSASVSDEEVSLYLGITKAELNKTVSEAALSTMISMDDEHFEERRTVKNHHVGSPER
HLSDRMMKESLVRAIERLPEKEKITVSLCYFEEMKLTEIAEILGVSVSRVSQLHSKAMLR
LHASILSVHDHY
NT seq 759 nt   +upstreamnt  +downstreamnt
atgctgaatcccaaattatcaaaagaagaactctcctgctggagcgattggcaacaacac
caagatccagaagctggcgaatacttggttgaacaatatcttcctttggttgattacgtg
attcaacggttcatgatcagtttaccgaaaactgtggaaaaagatgatgtccgcagctat
gcctatgaaggattactcgatgccttaagtaaattcgatatcgaaagagatttgaaattt
gaaacctatgcttcctggcgcatcaaaggcgcgattattgacgggttgcgacatagtgat
tggttgccgcgatccgttagagaaaaagtaaagaaaattgaaaaagcctatcttttatta
gagcagcaaaatagcgcttctgtgtctgacgaggaagttagtttgtatttgggtattacg
aaagctgagcttaataagacagtttcagaagcagcgctatcaacaatgatttcaatggat
gacgaacactttgaagaacgacgaacagtgaaaaaccatcacgtaggctcgccagaacgc
catttatcagatcgaatgatgaaagaatcgctagttcgtgccattgaacggttgcctgaa
aaagaaaaaattacggtgtcattatgctattttgaagaaatgaaattaaccgaaattgcc
gaaattctcggcgttagtgtatcaagagtttcacagcttcactcaaaagctatgcttcga
ctgcatgcttcgattttatctgtacacgatcattattga

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