Pseudomonas khavaziana: QYQ93_00255
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Entry
QYQ93_00255 CDS
T10400
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
pkv Pseudomonas khavaziana
Pathway
pkv02025
Biofilm formation - Pseudomonas aeruginosa
pkv03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pkv00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
QYQ93_00255 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
QYQ93_00255 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pkv02044
]
QYQ93_00255 (tssM)
Secretion system [BR:
pkv02044
]
Type VI secretion system
Imp/Vas secretion system core components
QYQ93_00255 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
T7_gp14
DUF2383
Motif
Other DBs
NCBI-ProteinID:
WWA76703
LinkDB
All DBs
Position
complement(52119..55619)
Genome browser
AA seq
1166 aa
AA seq
DB search
MKAFFSFMIRWVIPVLGLIALSLIIWFVGPLLDVLMPEGRRWALIILVFALWVAYRVFRI
IQARRQAAEVMRSLAAETPADPNSVATAEELSTLRQRMDEALMLLKKAKLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGAGAVRGVGGTRNCDWWFTDQAVLLDTAG
RYTTQDSNSTVDKAAWLGFLDLLKKQRSRRPIDGAFIAISLSDLLLGTDAERAAHAAAIR
LRIQELYTQLGVRFPIYLMLTKLDLVPGFMEFFDNLSKEERAQVWGMTFALDDGKNSDSP
LAHLQSEFTGLEQRLNQRLVERLQQERDPARRDLIYGFPQQFGALKDCLQSFLEGVFKPN
AFEERVLLRGVYFTSGTQEGSPIDRLIGAMAQSMNLDRQHLARQSGTGRSYFIEKLFTAV
AFAERGLVGVNPKVERRRKWIARGVLAATVALVVVVGSLWWVSYRANQAYIAQVDQKVAP
LGQTVQNLSPAQREVLAVLPLLNAVKNLAGDSPSWSEGLGLYQGDMLEAESASVYRKLLI
AVFAPRLVTRIEEQLHGGGNSDFLYEGLKAYLMLADTEHYDADFIKAWIALDWDRNLPRD
LPADQRQALAGHLQALFERHPPSARLDPRLIDDLRRQLQQLPVAQRVYDRVKRQKLPEGI
PDFRLNEAAGRDAALVFSRKSGKPLGEPLSGFFTAKGYRQAFLLSSLNQTGTLAEEQWVL
GHEQADQQNVVSLAADVRRLYFQDYQRQWDALLADIDFVPITSVAQAADVLRVISGPTSP
LKKLLVAVAKETDLQTEERQLAAKGVPVEGGVDKLKERLGSLLGQEQPTANAPVVADDPV
TAHFAELNSTVSKNEGEPAAIDGLLSDMNALYVQVSAMVGASGDALLGEAKNQAAAAATR
VSLNAERQPPLVQGMVKSVVNSTTNSMMGGVRNQLNAAWVSEVVNVYRQSLAGRYPMSPG
SARDATLDDFGQFFGVGGVMDNYFRKYLQPYVDTSAQTWRWQPGAAQKLGIAPGVLQTFQ
RAATIRDAFFRSGGTQPIVRFELKPVSMDPTITQFLLDLDGQQLSYDHGPSRPVAMQWPN
PGSIGVVRISIMPPSASGRSGITLDGPWAWFRLLEQSDLTAGNSPDRFNLRLRVDGASIA
YELRANSAFNPFKSRVLSGFSLPERL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgtttttcagtttcatgattcgctgggtgatccccgtgctgggcctgattgcc
ctgagcctgatcatctggtttgtcgggccgttgctcgatgtgctgatgcccgagggtcga
cgttgggcgctgatcatcctggtatttgcgctgtgggtcgcctaccgcgtgttccgcatt
atccaggcccgccgccaggccgccgaagtgatgcgcagcctggccgccgaaaccccagcc
gaccccaacagcgtcgccactgccgaagaattgtcgaccctgcgccagcgcatggacgaa
gccctgatgctgctgaaaaaagccaagcttggtggcgatgagcggcgcaacctctacgag
ctgccatggtacgtgatcatcggcccgccgggttcgggcaagaccaccgcgttggtcaat
tccgggctgcattttccgctggcggcacaattgggtgccggtgcggtgcgaggcgtcggc
ggcacgcgcaactgcgactggtggtttaccgatcaagcggtattgctcgacaccgctggc
cgctacaccacccaggacagcaactccacggtggacaaagccgcgtggctgggcttcctc
gacctgctgaaaaagcagcgctcgcgccggcccatcgacggtgcgtttatcgccatcagc
ctgtcggatctgctgttgggtacagacgccgagcgcgctgcccatgccgccgcaatacgc
ctgcgcatccaggagctgtacacccagctgggcgtgcgtttcccgatctacctgatgctc
accaagctcgacctggtgccgggcttcatggagttcttcgacaatctgagtaaggaagag
cgcgcccaggtgtggggcatgacctttgccctggacgacggcaagaatagcgacagcccg
ttggcgcacctgcaaagcgaattcaccgggctggaacaacgcctcaatcaacgcttggtc
gaacgcctgcaacaggaacgcgacccggcgcggcgcgacctgatctacggtttcccgcag
cagttcggcgcgttgaaggactgcctgcaaagcttcctcgaaggcgtgttcaaacccaac
gcctttgaagagcgcgtgttgctgcgcggtgtgtatttcaccagcggcacccaggaaggc
agcccgattgaccgcttgatcggcgccatggcccagagcatgaacctggaccgccagcac
ctggcgcgccagagcggcaccgggcgcagttacttcatcgaaaaactcttcaccgccgtg
gccttcgccgagcgtggcttggtgggggtgaacccgaaagtcgaacggcgccgcaagtgg
atcgcccgtggcgtactggccgccaccgtcgccttggtcgtagtggtcggcagcctatgg
tgggtgagttatcgcgccaatcaggcgtacatcgcccaggtcgaccagaaggtcgcgccc
ctggggcagacggtacaaaacctgagcccggcacaacgggaagtgcttgccgtgctgccg
ttgctcaatgcggtcaagaacctggcgggggactcgccaagctggtccgaagggcttggg
ctgtatcaaggcgatatgcttgaagccgagtccgccagcgtctatcgcaagctgttgatc
gccgtcttcgcgccgcgtctggtgacgcgtatcgaagagcaactgcacggcggcggtaac
tcggacttcctctatgagggcctcaaggcttacctgatgctcgccgacaccgagcattac
gacgcggactttatcaaggcctggatcgccctggactgggaccgtaacctgccccgcgac
ctgccggccgaccaacgccaggccctggccgggcacttgcaggcactgttcgaacggcac
ccgccgagtgcccgcctggacccgcgccttattgatgacctgcgccgccagttgcagcaa
ctgccggtggcgcagcgcgtatatgaccgggtcaagcgccagaaactgccggaaggtatc
ccggactttcgcctcaacgaagccgctggccgtgatgccgcgctggtgttcagccgcaaa
agcggcaaacccttgggtgagccgctgagtgggttcttcaccgccaagggctatcgtcag
gcgttcctgctgagcagcctgaaccagaccggcaccctggccgaggagcagtgggtgttg
ggccatgaacaggccgatcagcagaacgtggtgagcctggccgctgatgtgcgccgcctg
tatttccaggactaccagcgccagtgggatgcgctgctcgccgacatcgacttcgtgccg
atcaccagcgtggcccaggctgccgacgtattgcgggtgatttccgggccgacctcgcca
ctgaaaaaactgttggtggcggtggccaaggaaaccgatctgcaaaccgaagaacgtcaa
ttggccgccaaaggtgtgccggtggagggcggcgtcgacaaactcaaggagcgcctcggc
agtttgctcggccaggaacaacccacggcgaatgccccggtggttgcggatgatccagtg
accgcgcactttgccgaactcaacagcaccgtcagtaaaaacgaaggcgagccggccgcc
atcgacggcctgctctcggacatgaatgcgctgtatgtgcaagtcagcgccatggtcggc
gccagcggcgatgcgctgctcggtgaggccaagaaccaggcagcggctgcggccacgcgg
gtcagcctgaatgccgagcgccagccgccgctggtgcagggcatggtcaagtcggtggtc
aattccaccaccaacagcatgatgggcggggtgcgcaaccagttgaacgcggcctgggtc
agcgaggtggtcaacgtgtatcgccagtcgttggcggggcgttacccgatgtcgccgggc
agtgcacgggacgccaccctggatgacttcggccaattcttcggcgtgggcggggtgatg
gataactacttccgcaaatacctgcagccctatgtggatacatcggcacagacctggcgc
tggcagccgggcgcggcgcagaagctggggattgccccgggcgtgctgcaaaccttccag
cgtgcggcgactatccgtgatgcgttctttagatccgggggcacccagccgatcgtgcgt
ttcgagctcaagccggtgtcgatggacccgaccatcacccagttcctgctcgatctggac
ggccagcaattgagctacgaccacggcccgagccgcccggtggcgatgcaatggccgaac
cccggcagcattggcgtggtgcgcatttccatcatgccaccgtcggccagtggtcgctcc
ggcatcaccctggacggcccatgggcttggttccgcctgctggagcaatcggaccttacc
gccggcaactcgccggatcgcttcaacctgcgcttgcgggtcgacggcgccagcatcgcc
tacgaattgcgtgccaacagtgccttcaacccgttcaagagccgggtactcagcggcttc
agcctgccggagcggctatga
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