Pseudomonas khavaziana: QYQ93_00585
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Entry
QYQ93_00585 CDS
T10400
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pkv Pseudomonas khavaziana
Pathway
pkv03420
Nucleotide excision repair
pkv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pkv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QYQ93_00585 (uvrD)
03430 Mismatch repair
QYQ93_00585 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkv03400
]
QYQ93_00585 (uvrD)
Enzymes [BR:
pkv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QYQ93_00585 (uvrD)
DNA repair and recombination proteins [BR:
pkv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QYQ93_00585 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
QYQ93_00585 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WWA76766
UniProt:
A0ABZ2DLB7
LinkDB
All DBs
Position
135974..138157
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
AACLRAGVIDFSELLLRALDLWRDNPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSEDFPDAVTIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINIPARGI
GEKTVEAIRDHARHADVSMWEAMRLLIANKGLTGRAAGALGVFVELIENLAAKCAEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARAFENTEDDEELTPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
QQNSSTMFAGSEIPETPFSLGQQVRHAIFGEGVILNFEGAGAQARVQVNFAEGSKWLMMG
YAKLEAV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctctcttttgctgaactccctcaacgatgcccaacgccaggccgta
gcggcccccgttggccgtcagttggtcctggccggtgctggctccggtaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgaaaacgcgtccccgcactccatcctg
tcggtgaccttcaccaacaaggccgctgccgagatgcgccatcgcatcgagcagttgatg
ggcatcagcccggccggcatgtgggtgggcaccttccacggcctggcacaccgcctgttg
cgggcgcattggcaggaagcggggctgagccagaccttccagattctcgacagcgatgac
cagcaacgcctggtcaagcgcgtgatccgcgaactgggcctcgacgaacaacgttggccg
gcgcgccaggcccagtggtttatcaatggccagaaggacgagggcctgcgtccgcaacat
atccaggccagcggcgatttgttcctggctaccatgcgcagcatttatgaagcctacgag
gcggcttgcttgcgcgccggcgtgatcgacttctccgagctgttactgcgcgccctcgac
ctgtggcgcgacaaccccggtttgctggcccattaccagaagcgcttccgccacatcctg
gtggatgagttccaagacaccaacgccgtgcaatacgcctggttgcgcctgctggccaag
ggcggcgacagcctgatggtggtgggcgatgacgaccagtcgatctacggctggcgcggc
gcgaaaatcgagaacatctaccagtactccgaagatttcccggacgcggtgaccattcgc
ctggagcagaactaccgctccaccgccgggattctcaaggccgccaatgccttgatcgcc
aacaacaccgggcgcctgggcaaagagctgtggaccgacggcggcgaaggcgaggcgatc
aacctgtacgcggcgttcaacgagcacgatgaagcgcgctacgtggtggaaaccatcgaa
agcgcgctgaaaaccggcctggcgcgcagcgatatcgcgattctgtaccgctccaacgcc
caatcgcgggtgctggaagaagccttgttgcgcgaacgcatcccctaccgtatctatggc
ggccagcgcttctttgaacgggcggaaatcaagaacgccatggcctacctgcgcttgctg
gaaggccgtggcaacgatgcagccctggagcgcgtgatcaatatcccggcccgtggcatc
ggcgagaaaaccgtcgaagcgatccgcgaccatgcacgccatgccgatgtgtcgatgtgg
gaggccatgcgtttgctgatcgccaacaaaggcctgaccggccgcgccgccggggcgctg
ggtgtgtttgtcgagctgatcgagaacctggccgccaagtgcgcagaaatgcccctgcac
ctgatgacccagaccgtgatcgagcagtccgggctgatcgcctatcacgaagcggaaaaa
ggcgagaaaggccaggcccgggtagaaaaccttgaggaactggtcagtgccgcccgcgcc
ttcgaaaacaccgaggacgacgaagagctgacgccgctcgccgccttcctgggccacgcg
tcgctggaagctggcgatactcaggccgatgagcacgaagacagcatccagctgatgacc
ttgcacagcgccaagggcctggaattcccctacgtattcctggtgggcatggaagaaggc
ctgttcccccacaagatgagcctggaagaacccggccgcctcgaggaagaacgccgcctg
gcttatgtaggcattacccgggcgatgcagaacctggtgatgacctatgccgagacccga
cgcctgtacggcagcgaaacctacaacaaggtgtcgcgctttgtacgtgaagtgccgaaa
gggctgatccaggaagtgcgcctttccaacagcgtcagccgcccgttcggcggtggacag
cagcaaaattccagcaccatgttcgccggttccgaaattccggaaaccccgttcagcctg
ggccagcaggtcaggcatgcgatcttcggcgagggcgtgatcctcaacttcgaaggcgcc
ggtgcccaggcgcgggtgcaggtgaacttcgccgaaggcagcaagtggctgatgatgggc
tatgcaaagctcgaagcggtctga
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