Pseudomonas khavaziana: QYQ93_01340
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Entry
QYQ93_01340 CDS
T10400
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pkv Pseudomonas khavaziana
Pathway
pkv03030
DNA replication
pkv03410
Base excision repair
pkv03420
Nucleotide excision repair
pkv03440
Homologous recombination
Brite
Enzymes [BR:
pkv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QYQ93_01340 (polA)
DNA replication proteins [BR:
pkv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QYQ93_01340 (polA)
DNA repair and recombination proteins [BR:
pkv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QYQ93_01340 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QYQ93_01340 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WWA76910
LinkDB
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Position
295936..298731
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AA seq
931 aa
AA seq
DB search
MSQSPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDEMFAEYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSSMDVEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLKELYEQLDIVPTLPIRGAKTLPAKLQEHKEM
AFLSYQLATIKIDVPLEVGLDDLHLIEPDREKLLELYTLLEFKSWYEEILRDAKRVELKS
ASEVVPVAETLVEAVISVPVEAVYTTILDQATFDVWLKKLHDAPLFAFDTETTGIDAQQA
QLVGLSFAVRPHEAAYIPLTHSYIGAPDQLDRDTVLLALKPLLEDPTKLKVGQHAKFDMN
ILANCAIGGDPAQGITVRGIAFDTMLESYVLNSTATRHDMDSLAKKYLDHDTVSFQDIAG
KGAKQLTFDQIALEQAGPYAAEDADVTLRLHQELHAKLAAIPSLASVLTNIEIPLVPVLA
RIERQGALVDKALLGIQSIELGNKMVELERQAFEIAGEAFNLGSPKQLGAILYEKLGLPV
LKKTGKGQASTAEEVLAKLAEDDFLLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHT
SYHQAVAATGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHL
SKDEGLMNAFRNNLDVHTATAAEVFKVELGQVTSDQRRSAKAINFGLIYGMGAQKLGKDI
GVDTKTAKAYIDVYFARYPGVREYMERTRAQAADQGYVETFFGRRLYLPDINSNKPQERA
AAERTAINAPMQGTAADIIKKAMVLVDDWLTESGLDAKVILQVHDELVLEVREDLVAQVG
EKIREHMSRAAQLDVPLVVDVGVGDNWDQAH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatcgcccctcgtcctggtggacggttcttcttatctgtaccgcgccttccat
gcgctgccaccgctgaccacctccaaaggcctgccgaccggtgcggtcaagggcgtgttg
aacatgctcaaaagcctgcgcaagcagtacccggacagccccttcgcggtggtctttgac
gccaagggcgggacctttcgcgatgaaatgttcgccgaatacaaggccaaccgcccgagc
atgcccgatgacatgcgcctgcagatcgagccgctgcaccagagcgtgatcgccctgggc
ttccctttgctgtgcgtcgaaggcgtcgaggccgatgacgtgatcggcaccctggcccgc
agcagcgcggccgctgaccgcccggtggtgatttctaccggcgacaaggacatggcgcag
ttggtcgacgggcacattaccttggtcaacaccatgacgggtagttcgatggatgttgag
ggcgtaaaggagaaattcggcgtcgctccggagcagatcatcgactatctggcgctgatg
ggagattcgtccgacaacatcccaggcgttccgggcattggtccgaagacggcttccggc
ttgctggtgggggtcaatggcggcctcaaagagctttatgagcagttggatattgtgccg
accctgcctatccgcggggccaagaccctgccggccaagctgcaagagcacaaggaaatg
gcgttcctgtcctatcagctggcgacgatcaagatcgatgtgccgctggaggtgggcctg
gatgatctgcacctgatcgagccagaccgcgagaagctgctggagctgtacacgctgctt
gagttcaagagctggtacgaagagatcctgcgcgatgccaagcgcgtggagcttaagtcg
gcgagcgaggttgtgcctgtcgccgaaacgctggttgaggctgttatatcggtaccggta
gaggcggtttacaccaccatcctggaccaggccacgttcgacgtatggctgaagaaactc
cacgatgcgccgttgtttgccttcgacaccgaaaccaccggtatcgatgcccagcaggcg
caattggtcgggctctcgttcgctgtgcggccccacgaagccgcctacatcccgctgacc
cattcctatatcggcgcgccggatcaattggaccgggacaccgtgctgctggccctgaaa
ccgctgctggaagacccgaccaaactcaaggttggccagcacgccaagttcgatatgaac
atcctcgccaactgcgccatcggtggcgaccctgcacagggcatcactgtgcgtggtatc
gccttcgacaccatgctcgaatcctacgtgctgaactccacggcgacccgccacgacatg
gacagcctggcgaagaagtatctggaccacgacacggtcagcttccaggacatcgccggc
aagggtgccaagcagctgaccttcgaccagattgccctcgagcaggccggcccttacgcc
gccgaagatgccgatgtgaccttgcgcctgcatcaggaactgcacgcgaagctggccgcg
atcccgagcctggccagtgtactgacgaatatcgagataccgttggtgccggtactggcg
cgtatcgagcgccagggcgcattggtggacaaggcgttgctgggtatccagagcatcgag
ctgggtaacaagatggttgaactggagcgccaggcgttcgagatcgccggcgaagcgttc
aacctgggttcacccaagcagcttggggcgatcctttatgaaaaactgggcttgccggtg
ttgaagaagaccggcaagggccaggcatccaccgccgaggaggtgctggccaagctggcc
gaagatgatttcctgttgcccaaggtgctgatgcagtaccgcagcatgagcaagctcaag
agcacctacaccgaccgcctgcctgagcagatcaacccgcgtaccgggcgcatccacacc
tcttatcatcaggccgtggcggcgaccgggcggctgtcctccagtgacccgaacttgcag
aacatcccggtgcgcactgccgaaggacggcggattcgccaggcgttcgtcgcgcccaag
ggctacaaactgctggcggcggactattcgcagatcgaactgcggatcatggcgcacctg
tccaaggacgaaggcttgatgaatgcctttcgcaataatctggatgtgcatacggccacg
gcggccgaggtgttcaaggtcgagctgggccaagtcacatctgatcagcgccgtagcgcc
aaggccattaactttggcctgatctatggcatgggcgcccagaagctcggcaaggacatt
ggcgtcgataccaagaccgccaaggcttatatcgatgtctactttgcccgttatcccgga
gttcgcgagtacatggagcgcactcgtgcccaggctgccgaccagggttatgtagaaacg
ttcttcgggcgccggctgtacttaccggatatcaactccaacaagcctcaggagcgcgcg
gcggcagaacgcacagcgatcaacgcgccgatgcagggaacggcggcggatatcatcaag
aaagccatggtgttggtggatgattggctgaccgagtcgggcctggatgccaaggtgatc
ctgcaggtgcacgatgaactggtacttgaggtgcgcgaagacttggtggcgcaggtcggc
gagaagattcgcgaacatatgagtcgcgcagcacagctggatgtgccgttggtggtggat
gtgggcgtgggcgacaactgggaccaagcgcactga
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