KEGG   Pseudomonas khavaziana: QYQ93_01340
Entry
QYQ93_01340       CDS       T10400                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pkv  Pseudomonas khavaziana
Pathway
pkv03030  DNA replication
pkv03410  Base excision repair
pkv03420  Nucleotide excision repair
pkv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pkv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    QYQ93_01340 (polA)
   03410 Base excision repair
    QYQ93_01340 (polA)
   03420 Nucleotide excision repair
    QYQ93_01340 (polA)
   03440 Homologous recombination
    QYQ93_01340 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pkv03032]
    QYQ93_01340 (polA)
   03400 DNA repair and recombination proteins [BR:pkv03400]
    QYQ93_01340 (polA)
Enzymes [BR:pkv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     QYQ93_01340 (polA)
DNA replication proteins [BR:pkv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     QYQ93_01340 (polA)
DNA repair and recombination proteins [BR:pkv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     QYQ93_01340 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     QYQ93_01340 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: WWA76910
UniProt: A0ABZ2DFS6
LinkDB
Position
295936..298731
AA seq 931 aa
MSQSPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDEMFAEYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSSMDVEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLKELYEQLDIVPTLPIRGAKTLPAKLQEHKEM
AFLSYQLATIKIDVPLEVGLDDLHLIEPDREKLLELYTLLEFKSWYEEILRDAKRVELKS
ASEVVPVAETLVEAVISVPVEAVYTTILDQATFDVWLKKLHDAPLFAFDTETTGIDAQQA
QLVGLSFAVRPHEAAYIPLTHSYIGAPDQLDRDTVLLALKPLLEDPTKLKVGQHAKFDMN
ILANCAIGGDPAQGITVRGIAFDTMLESYVLNSTATRHDMDSLAKKYLDHDTVSFQDIAG
KGAKQLTFDQIALEQAGPYAAEDADVTLRLHQELHAKLAAIPSLASVLTNIEIPLVPVLA
RIERQGALVDKALLGIQSIELGNKMVELERQAFEIAGEAFNLGSPKQLGAILYEKLGLPV
LKKTGKGQASTAEEVLAKLAEDDFLLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHT
SYHQAVAATGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHL
SKDEGLMNAFRNNLDVHTATAAEVFKVELGQVTSDQRRSAKAINFGLIYGMGAQKLGKDI
GVDTKTAKAYIDVYFARYPGVREYMERTRAQAADQGYVETFFGRRLYLPDINSNKPQERA
AAERTAINAPMQGTAADIIKKAMVLVDDWLTESGLDAKVILQVHDELVLEVREDLVAQVG
EKIREHMSRAAQLDVPLVVDVGVGDNWDQAH
NT seq 2796 nt   +upstreamnt  +downstreamnt
atgagccaatcgcccctcgtcctggtggacggttcttcttatctgtaccgcgccttccat
gcgctgccaccgctgaccacctccaaaggcctgccgaccggtgcggtcaagggcgtgttg
aacatgctcaaaagcctgcgcaagcagtacccggacagccccttcgcggtggtctttgac
gccaagggcgggacctttcgcgatgaaatgttcgccgaatacaaggccaaccgcccgagc
atgcccgatgacatgcgcctgcagatcgagccgctgcaccagagcgtgatcgccctgggc
ttccctttgctgtgcgtcgaaggcgtcgaggccgatgacgtgatcggcaccctggcccgc
agcagcgcggccgctgaccgcccggtggtgatttctaccggcgacaaggacatggcgcag
ttggtcgacgggcacattaccttggtcaacaccatgacgggtagttcgatggatgttgag
ggcgtaaaggagaaattcggcgtcgctccggagcagatcatcgactatctggcgctgatg
ggagattcgtccgacaacatcccaggcgttccgggcattggtccgaagacggcttccggc
ttgctggtgggggtcaatggcggcctcaaagagctttatgagcagttggatattgtgccg
accctgcctatccgcggggccaagaccctgccggccaagctgcaagagcacaaggaaatg
gcgttcctgtcctatcagctggcgacgatcaagatcgatgtgccgctggaggtgggcctg
gatgatctgcacctgatcgagccagaccgcgagaagctgctggagctgtacacgctgctt
gagttcaagagctggtacgaagagatcctgcgcgatgccaagcgcgtggagcttaagtcg
gcgagcgaggttgtgcctgtcgccgaaacgctggttgaggctgttatatcggtaccggta
gaggcggtttacaccaccatcctggaccaggccacgttcgacgtatggctgaagaaactc
cacgatgcgccgttgtttgccttcgacaccgaaaccaccggtatcgatgcccagcaggcg
caattggtcgggctctcgttcgctgtgcggccccacgaagccgcctacatcccgctgacc
cattcctatatcggcgcgccggatcaattggaccgggacaccgtgctgctggccctgaaa
ccgctgctggaagacccgaccaaactcaaggttggccagcacgccaagttcgatatgaac
atcctcgccaactgcgccatcggtggcgaccctgcacagggcatcactgtgcgtggtatc
gccttcgacaccatgctcgaatcctacgtgctgaactccacggcgacccgccacgacatg
gacagcctggcgaagaagtatctggaccacgacacggtcagcttccaggacatcgccggc
aagggtgccaagcagctgaccttcgaccagattgccctcgagcaggccggcccttacgcc
gccgaagatgccgatgtgaccttgcgcctgcatcaggaactgcacgcgaagctggccgcg
atcccgagcctggccagtgtactgacgaatatcgagataccgttggtgccggtactggcg
cgtatcgagcgccagggcgcattggtggacaaggcgttgctgggtatccagagcatcgag
ctgggtaacaagatggttgaactggagcgccaggcgttcgagatcgccggcgaagcgttc
aacctgggttcacccaagcagcttggggcgatcctttatgaaaaactgggcttgccggtg
ttgaagaagaccggcaagggccaggcatccaccgccgaggaggtgctggccaagctggcc
gaagatgatttcctgttgcccaaggtgctgatgcagtaccgcagcatgagcaagctcaag
agcacctacaccgaccgcctgcctgagcagatcaacccgcgtaccgggcgcatccacacc
tcttatcatcaggccgtggcggcgaccgggcggctgtcctccagtgacccgaacttgcag
aacatcccggtgcgcactgccgaaggacggcggattcgccaggcgttcgtcgcgcccaag
ggctacaaactgctggcggcggactattcgcagatcgaactgcggatcatggcgcacctg
tccaaggacgaaggcttgatgaatgcctttcgcaataatctggatgtgcatacggccacg
gcggccgaggtgttcaaggtcgagctgggccaagtcacatctgatcagcgccgtagcgcc
aaggccattaactttggcctgatctatggcatgggcgcccagaagctcggcaaggacatt
ggcgtcgataccaagaccgccaaggcttatatcgatgtctactttgcccgttatcccgga
gttcgcgagtacatggagcgcactcgtgcccaggctgccgaccagggttatgtagaaacg
ttcttcgggcgccggctgtacttaccggatatcaactccaacaagcctcaggagcgcgcg
gcggcagaacgcacagcgatcaacgcgccgatgcagggaacggcggcggatatcatcaag
aaagccatggtgttggtggatgattggctgaccgagtcgggcctggatgccaaggtgatc
ctgcaggtgcacgatgaactggtacttgaggtgcgcgaagacttggtggcgcaggtcggc
gagaagattcgcgaacatatgagtcgcgcagcacagctggatgtgccgttggtggtggat
gtgggcgtgggcgacaactgggaccaagcgcactga

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