Pseudomonas khavaziana: QYQ93_02370
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Entry
QYQ93_02370 CDS
T10400
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pkv Pseudomonas khavaziana
Pathway
pkv00521
Streptomycin biosynthesis
pkv00523
Polyketide sugar unit biosynthesis
pkv00541
Biosynthesis of various nucleotide sugars
pkv01100
Metabolic pathways
pkv01110
Biosynthesis of secondary metabolites
pkv01250
Biosynthesis of nucleotide sugars
Module
pkv_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pkv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
QYQ93_02370 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
QYQ93_02370 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
QYQ93_02370 (rfbC)
Enzymes [BR:
pkv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
QYQ93_02370 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WWA77103
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Position
complement(542703..543248)
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AA seq
181 aa
AA seq
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MNVSATELPGVLVIEPKVFGDERGFFYESFNAREFEKASGLHLQFVQDNHSRSQKGVLRG
LHYQVEHAQGKLVRVTAGEVLDVAVDIRRSSPHFGKWASVRLSAENNRQLWIPPGFAHGF
VVLSDYAEFLYKTTDYYTPSAERCISWDDPDLNIDWQLNGPPTLSAKDQNGKRLKDADLF
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgagcgccactgagctgcccggcgtactggtcatcgagccgaaggtttttggc
gatgagcgcggctttttctatgagagcttcaatgcccgcgagtttgaaaaggccagcggg
ctgcacctgcagtttgtgcaggacaatcactcgcgctcgcaaaaaggtgtgctgcgtggc
ctgcattatcaggttgagcacgctcagggaaaactggtgcgtgtgactgccggtgaagtc
ttggacgtggcggtggatatccgccgcagctccccgcatttcggcaaatgggccagcgtg
cgcctgtctgccgaaaataaccgccaactgtggattccaccggggtttgcccacggcttt
gtggtgctcagcgactacgcagaatttctttacaagaccacggactactacacaccgtca
gctgaacgttgcattagttgggatgacccggaccttaatatcgattggcaactcaatggt
ccaccgaccttgtccgccaaggatcaaaacggcaaacgcctgaaagatgcggacctgttc
ccgtga
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