Pseudomonas khavaziana: QYQ93_08735
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Entry
QYQ93_08735 CDS
T10400
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pkv Pseudomonas khavaziana
Pathway
pkv00071
Fatty acid degradation
pkv00280
Valine, leucine and isoleucine degradation
pkv00310
Lysine degradation
pkv00362
Benzoate degradation
pkv00380
Tryptophan metabolism
pkv00410
beta-Alanine metabolism
pkv00640
Propanoate metabolism
pkv00650
Butanoate metabolism
pkv00907
Pinene, camphor and geraniol degradation
pkv00930
Caprolactam degradation
pkv01100
Metabolic pathways
pkv01110
Biosynthesis of secondary metabolites
pkv01120
Microbial metabolism in diverse environments
pkv01200
Carbon metabolism
pkv01212
Fatty acid metabolism
Module
pkv_M00087
beta-Oxidation
pkv_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pkv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
QYQ93_08735 (fadB)
00650 Butanoate metabolism
QYQ93_08735 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
QYQ93_08735 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
QYQ93_08735 (fadB)
00310 Lysine degradation
QYQ93_08735 (fadB)
00380 Tryptophan metabolism
QYQ93_08735 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
QYQ93_08735 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
QYQ93_08735 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
QYQ93_08735 (fadB)
00930 Caprolactam degradation
QYQ93_08735 (fadB)
Enzymes [BR:
pkv01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
QYQ93_08735 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
QYQ93_08735 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
QYQ93_08735 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
QYQ93_08735 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WWA78313
UniProt:
A0ABZ2DPR7
LinkDB
All DBs
Position
1963876..1966023
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMSTTAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENKAEDAL
KVGAVDAVVAPDKLAEAALNLIKGAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAQVK
DDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYEADKKGKQ
KKVADPSVHEVLAPVIYEQREVSDEDIINWMMIALCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGPLYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaactg
cgtcaggccgtagacaccatcaaagcagatgcttcggtcaagggcgtgatcgtctccagc
ggcaaggacgtgtttatcgtcggcgctgacatcaccgaattcgtcgacaacttcaagctg
cccgatgccgagctggtggctggcaacctcgaagccaacaagatcttcagcgatttcgaa
gacctcaacgtgccgaccgttgccgcgatcaatggcatcgcgctgggcggcggcctggaa
atgtgcctggcggcggatttccgcgtcatgtccaccaccgccaagatcggcctgccggaa
gtcaagctgggcatctacccaggctttggcggtaccgtgcgcctgccgcgtctgatcggt
gccgacaacgccatcgaatggatcgctgccggtaaggaaaacaaggccgaggacgcgctg
aaagtcggtgcggtcgacgctgtagttgccccggacaaactggccgaagctgcgctgaac
ctgatcaagggcgccatcagcggcgaatttgactacaaggccaagcgtcagccgaagctg
gaaaagctcaagctcaacgccatcgaacaaatgatgtcgttcgaaaccgccaagggtttc
gtggctggccaggccggcccgaactacccggcgccggttgaagcgatcaagaccatccag
aaggccgcgaacttcggtcgcgacaaagccctggaagtggaagcggccggcttcgtcaaa
ctggcgaagacctcggcggcccagagcctgatcggcttgttcctgaacgatcaggaactg
aagaaaaaggccaaggcctacgacgaaatcgccaaggacgtgaagcaggctgccgtactc
ggcgccggtatcatgggcggcggcatcgcctatcagtcggcgtccaaaggcacgccgatc
ctgatgaaagacatcaacgagcacggtatcgagcagggcctggcggaagccgccaagctg
ctggttggccgtgttgataaaggtcgcatgaccgcggcaaaaatggccgaggtgcttaac
ggtatccgtcctacgttgtcctacggcgatttcggccacgtcgacctggtggtcgaagcg
gttgtcgagaacccgaaggtcaagcaggcggtattggctgaagttgaagcccaggtcaag
gacgacaccatcctggcgtccaacacctcaaccatttccatctcgctgctggccaaggcc
ctcaagcgcccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccc
ctggtggaagtgatccgtggcgagaagtccagcgagctggcggttgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaatgactgcccgggctttttggtc
aaccgtgtactgttcccctacttcggcggtttcgccaagctggtcagcgccggtgtggac
ttcgtgcgcatcgacaaggtcatggaaaaattcggctggccaatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccacggtcgcgatgtgatggctgaaggcttc
ccggaccgcatgaaagacgaccgccgctcggcgatcgacgctttgtacgaggccaagcgc
ctgggccagaagaacggcaagggtttctacgcctacgaggccgacaagaagggcaagcag
aagaaagtggccgacccgtcggtgcacgaagtcctcgctccggtcatctacgaacagcgt
gaggtgtccgacgaggacatcatcaactggatgatgatcgccctgtgcctggaaaccgtg
cgttgcctggaagatggcatcgtcgaaaccgccgctgaagccgacatgggcctggtatac
ggtattggtttccctccattccgtggtggtgcgctgcgttacatcgattcgatcggtgtg
gctgagttcgttgccctggctgacaaatacgctgatttgggcccgctgtaccacccgacc
gcgaagctgcgtgaaatggccaagaacggccagagcttcttcggttaa
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