Pseudomonas khavaziana: QYQ93_09500
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Entry
QYQ93_09500 CDS
T10400
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pkv Pseudomonas khavaziana
Pathway
pkv03018
RNA degradation
Brite
Enzymes [BR:
pkv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QYQ93_09500
Messenger RNA biogenesis [BR:
pkv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QYQ93_09500
Ribosome biogenesis [BR:
pkv03009
]
Prokaryotic type
rRNA helicases
QYQ93_09500
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WWA78458
LinkDB
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Position
2130306..2131979
Genome browser
AA seq
557 aa
AA seq
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MTQETGGFAAFNLNPNILAAVIATGYEEPSAIQQQSIPIIMAGQDMIGQAQTGTGKTAAF
ALPILHCIDPAKREPQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLK
AIRNGAQIVVATPGRLCDHLRRDEKVLSTVNHLVLDEADEMLKLGFMDDLEVIFKALPPT
RQTVLFSATLPQSIRAIAERHLRDPQHVKIQTKTQTVTAIEQAHLLVHADQKTSAVLSLL
EVEDFDALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVV
ATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVI
ERVTGQKVAEVRLPDAQAVLDARIKKLTNSLAPLVADAESTHGDLLDRLTADIGCTPRAL
AAALLRKATNGQALTLAAIEKERPLVPNSAPRGDRPERSGDRPDRGDRERRAPVPLAEGR
ARCRTALGARDGIAAKNLLGAILNEGGLAREAIGRIQVRDSFSLVELPEDGLEKLLAKLK
DTRVAGKQLKLRRYRED
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggaaaccggcggcttcgccgcttttaatcttaacccgaacattcttgctgcc
gtcatcgcgactggctacgaagaaccttcggctattcagcagcaatcgatcccgatcatc
atggccggccaagacatgattggccaggcgcaaaccggtaccggtaaaaccgccgcgttc
gccctgcctatcctgcattgcatcgatcctgccaagcgcgagccgcaagccctgatcctg
gcgccaacccgtgagttggcgctgcaagtagcaaccgctttcgaaacctacgccaagcaa
atgccgggcgtgaccgttgtggccgtttacggcggcgcgcctatgggcccacaactgaaa
gccatccgcaatggcgcacagatcgttgtcgccacccctggtcgcctgtgcgaccacctg
cgtcgtgacgagaaagtgctgtcgaccgtgaaccacctggttctggacgaagctgacgaa
atgttgaagctgggcttcatggatgacctggaagtcatcttcaaggcgctgcctccaacc
cgtcagaccgtactgttctcggccaccctgccgcagtcgatccgtgccattgccgagcgc
catctgcgcgatccgcaacacgtgaagatccagaccaagacccagaccgttaccgcgatc
gaacaggctcacctgttggttcacgctgaccagaagacctcggctgtattgagcctgctg
gaagtcgaagacttcgacgccctgatcatgttcgtgcgcaccaagcaagcgaccctggac
ctggccagtgccctggaagccaaaggctacaaggccgctgcgctgaacggtgacattgcc
cagaaccagcgtgagcgcgtgatcgactccctcaaggatggccgcctggacatcgttgtg
gcgaccgacgttgctgcccgtggccttgacgttccacgtatcacccacgtgttcaacgtt
gacatgccgtacgatccagagtcctacgttcaccgtatcggccgtaccggccgtgcgggt
cgcgaaggtcgtgctctgttgctggtgactccacgtgagcgccgcatgctgcaggtgatc
gaacgtgtaaccggtcagaaagttgccgaggtccgcctgccggatgcccaggccgttctc
gatgcccgcatcaagaaactgaccaacagcctggcccccctggtggctgacgctgaatcg
acccacggcgacctgctggaccgcctgaccgccgatatcggttgcaccccacgtgccttg
gctgcagccctgctgcgcaaagccaccaacggtcaggccctgaccctggccgccatcgag
aaagagcgcccactggtgccgaacagcgcgccacgcggtgatcgtccagagcgttccggc
gaccgtccggaccgtggtgatcgtgagcgtcgtgctccggtgccattggccgaaggccgt
gcacgttgccgtaccgcgttgggtgcgcgtgatggtatcgctgccaagaacctgctgggc
gctatcctcaatgagggtggcctggcgcgtgaagccatcggtcgcatccaggtgcgtgac
agcttctccctggtggagctgccggaagacggcctggaaaaactgctggccaagttgaaa
gacactcgcgttgccggtaagcagctcaagctgcgtcgctaccgcgaagattga
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