Pseudomonas khavaziana: QYQ93_16420
Help
Entry
QYQ93_16420 CDS
T10400
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pkv Pseudomonas khavaziana
Brite
KEGG Orthology (KO) [BR:
pkv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkv03400
]
QYQ93_16420
DNA repair and recombination proteins [BR:
pkv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QYQ93_16420
Archaeal homologous recombinant proteins
QYQ93_16420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
AAA_15
ABC_tran
nSTAND3
Snapin_Pallidin
RsgA_GTPase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WWA74422
LinkDB
All DBs
Position
3714134..3717772
Genome browser
AA seq
1212 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LGDTGQAKMPDADTDISIGDPRTLIRRGTGGGYAEVDFVGVSGRRYRARWEANRARDKAS
GKLQNSRQSLIDLDSEQLLASQKTEYKTQLELALGLNFEQFTRAVLLAQSEFSAFLKAND
NERSELLEKLTDTALYTQLGRRAFDKAKDAKDAHKQLQDQATGVVPLATEARAELDQQLA
DAQQQLKTQQAQLKQLELQHTWLKELREWQERQLSAVEQLQQAQQHWDSQGPQRQDLGRL
DQLAPQRHHFLRQAELDTLLTPLAAQIQQHIDQQAALHVRQEQSQQQQVAAHAALADALK
NQADAAPLLRQAVEEQNTLAHLTRELAKRTEEKQQHANACVEGQALLEGLQEKQARVAER
LHRLATELEHSAAFAPLSEAWNAYRDRLQQLMLTGNRLNQGQAELPQLEERANTAAAQFT
QQREALDLLYQEAGAEPHAVAEQIQLLASLLQDNRKQQRAFEDLARLWDSQQQLDQQAAT
LTQKLADAAQRREQLNQAGLQTKAELSVAEQALSVTKQLLERQRLARSASVEELRGQLQA
DQPCPVCGSHEHPFHQPEALLQSLGRHDENEEATAQKAVDSLKEKLTELRGEVGGLIAEQ
KEFLRQQEQLATQQQGLALSLQAHSLSASLFNQGVAQRSNWLAQQLAQLTQSISQDEQRQ
SALLNLQQNAGRLQQQLQAAQDASQQARQLLLDQQRELANDRERLDTELNAFVGLLPADT
LEGLRSDPATTFMRLDQQVSQRLEQLGHQRDELAEQQERQQAIEKQQTHQQHRQQQLDAL
TLQVDELAAQQQVIQEKLSAMLGEHPSAEHWQQQLEQSVEQSRQGESDANQQLHSVHTAL
VQIAADLKALQERQQALQAEQQDLTTRVTQWRALHPELDDDGLTRLLAFDEAQVAQLRQQ
LHASEKAVEQAKVLLQEREQRLAEHQALHNGNLDAEQLDNSLAMLNQQLADGENHCAELR
ARQSEDQRRQDANQALTEQITKAYEEWQRWARLNALIGSATGDTFRKIAQAYNLDLLVHH
ANVQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASMA
SSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQVK
RQGNGLSTLEVK
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcgccatccgcctgaaaaaccttgcctctctggccggcccgttcgaaatc
gactttaccgccgagcccctggccagtgcgggcctgttcgccatcaccgggccgaccggc
gccggtaaaagcaccctgctcgatgcattgtgcctggcgctctttggcgcggtgccgcgc
ctgggcgataccggccaggcgaagatgccggatgccgacaccgatatctccatcggtgac
ccgcgcaccctgattcgccgcggtaccggtggtggctacgccgaggtggatttcgtcggc
gtcagcggccgtcgctaccgtgcgcgctgggaagccaaccgtgcccgcgacaaggccagc
ggcaagttgcagaacagccgccaaagcctgatcgacctggacagcgagcaactgctggcc
agtcagaaaaccgaatacaagacccagctggaactggccctgggcctgaacttcgagcag
ttcacccgtgcggttttgctggcgcaaagcgagttcagcgcctttctcaaggccaatgac
aatgagcgcagcgaactgctggaaaagctcaccgacaccgcgctgtacacccagcttggc
cgccgtgccttcgacaaggccaaggacgccaaggacgcccacaaacagctgcaagaccag
gccaccggcgtagtgcccctggccaccgaagcccgcgccgagctggatcaacagctggcc
gacgcccagcaacagctaaagacccagcaggcccagctcaagcaactggagttgcagcac
acctggctcaaggaactgcgtgaatggcaggagcgccagctcagcgccgtcgaacagctg
cagcaagcccagcaacactgggacagccaaggcccgcaacgccaggacctgggtcgcctc
gaccagctggcgccgcaacgccatcacttcttgcgccaggcagaactcgacaccttgctg
acgccactggccgcgcagattcagcaacacatcgatcagcaagccgcactgcacgtccgc
caggaacaatcccaacaacagcaagtagccgcccacgcggcattggccgacgcgctgaaa
aaccaggccgacgccgcgcccttgctacgccaggccgtggaagaacaaaacaccctcgcc
cacttgacccgtgaactggccaagcgcacggaggaaaaacagcagcacgcaaacgcctgc
gtcgaaggccaggccctgctcgagggtttgcaggaaaagcaggcccgagtcgccgagcgc
ctgcatcgcctggccaccgagcttgagcacagcgccgccttcgcccccttgagcgaggcc
tggaatgcctaccgcgaccgcctgcaacagctgatgttgaccggcaatcgcctcaatcaa
ggccaggccgaactgccacagctcgaagagcgtgccaacaccgccgccgcacagttcacc
caacagcgtgaagccctggacctgctctatcaggaggccggtgccgaacctcacgcagtg
gccgaacagattcaattactggccagcctgctgcaagacaatcgcaagcaacagcgcgcc
ttcgaagacctggcgcgcttgtgggacagccaacaacagctggatcaacaggctgccacg
ctgacgcagaaactggctgacgctgcgcaacgacgcgaacagttgaaccaggctggcctg
caaaccaaggccgaactgagtgttgccgagcaagccttgtcggtgaccaagcaactgttg
gagcgccaacgcctggcccgcagtgccagcgtcgaggaactacgtgggcaattgcaggct
gaccaaccctgcccggtatgcggcagccacgagcatccgtttcaccagcccgaagccttg
ctgcaaagcctgggtcgccatgatgaaaacgaagaagccacggcacagaaagccgtggac
agcctcaaggaaaaactcaccgagttgcgcggtgaagtgggcggactgatcgccgaacaa
aaggaattcctgcgccaacaggagcagctggctacacagcagcagggcctggcactaagt
ctgcaagcccattcgctgtccgcttcgctgttcaatcagggcgtcgcccagcgcagcaac
tggctggcccaacaattggcacagctgacccaaagcatcagccaggacgaacagcgtcaa
agcgccctgctcaacctgcaacaaaacgccgggcgcttgcagcaacaactgcaagcggcc
caggacgccagccaacaagcccggcaattgctgctggaccagcagcgcgaactggctaac
gaccgtgaacgcctcgacacagaactcaacgccttcgtcggcctgttgccggccgacacc
cttgaaggtctgcgcagcgaccccgcgacgaccttcatgcgcctcgaccaacaggtcagc
caacgcctggagcagctaggccatcaacgtgatgaactggccgaacagcaagagcgccaa
caagccatcgagaaacaacagacccaccagcaacaccgtcagcagcagctcgacgccctg
actctgcaggtcgacgagttggcggcgcagcaacaggtaatccaggaaaaactcagcgcc
atgttgggtgagcatcccagcgccgaacactggcagcaacagctggagcagagcgtcgag
cagtcacgccagggcgagagtgacgccaaccagcaactgcatagcgtacacacagccctg
gtgcagatagcggcggacctcaaggccctgcaggaacgtcagcaagcactgcaagctgag
caacaggacctgacaacgcgcgtcacgcaatggcgcgcgttgcaccccgaactggatgac
gacggcctgacacgcctattggccttcgacgaggcccaggtcgcacaactgcgccagcaa
ctgcacgccagcgagaaagccgtcgagcaggccaaggtacttctgcaagagcgtgaacaa
cgcctggccgaacaccaggcattgcacaacggcaacctggacgccgagcaattggacaac
agcctggcgatgctgaatcagcaactggccgacggcgagaatcactgcgcggaactgcgc
gcacgtcaatctgaagaccagcgccgccaagacgccaaccaggccctcaccgaacagatc
accaaggcttacgaagagtggcaacgctgggcgcgcctgaatgcgctgatcggctcggcc
accggcgacaccttccgcaagatcgcccaggcttataacctcgatttgctggtgcatcat
gccaacgtacaactgcgccaactggtgcgccgctaccggcttaaacgcggcggcagcatg
ctcggcctgctggtgatggacaccgagatgggtgacgaactgcgctcggtgcactcgctg
tcgggtggcgaaaccttcctagtgtcgttggcgctggccctgggcctggcgtccatggcg
tcgagtaccttgaagatcgagtcgctgtttatcgacgaaggtttcggcagcctcgatcct
gagtcgctgcaattggccatggatgccctggacggcctgcaggcccagggccgcaaggtg
gcggtgatctcccacgtgcaggaaatgcacgagcgcatcccggtacagatccaggtcaag
cgtcagggcaatggcttgagcaccctggaggtcaagtga
DBGET
integrated database retrieval system
