KEGG   Pseudomonas khavaziana: QYQ93_16590
Entry
QYQ93_16590       CDS       T10400                                 
Name
(GenBank) sigma 54-interacting transcriptional regulator
  KO
K11914  sigma-54 dependent transcriptional regulator
Organism
pkv  Pseudomonas khavaziana
Brite
KEGG Orthology (KO) [BR:pkv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pkv03000]
    QYQ93_16590
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pkv02044]
    QYQ93_16590
Transcription factors [BR:pkv03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    QYQ93_16590
Secretion system [BR:pkv02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   QYQ93_16590
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 HTH_30 GAF_3 AAA_5 AAA_7 HTH_28 AAA_2 AAA_16
Other DBs
NCBI-ProteinID: WWA79372
LinkDB
Position
complement(3762819..3764333)
AA seq 504 aa
MQALTGTCAFTVDALAACFTRLGFESDEHVLPGKCVADVAQLARCELSQLYLLDEASDRL
ELVAQHFPDGPAPDLASTPVDLRNQQLLHYTLNRRAALSLDEVQGSCYDTRFLPVSPTPW
RALLSMPLFSATDRLTGVLLCASQSPLQLHSYAISLGQLGSFAVSRLLLLRGMRQRLGAT
PRQAVPLAGAYGLIGNSAAMAQTRELISKVLHTPYTVLLRGETGTGKEVVAQAIHAAGPR
GAKAFVVQNCAAFADGLLESELFGYRKGAFTGADRNHAGLFDAADGGTLLLDEIGDMPLL
LQAKLLRVLQEGEIRPLGASTAHKVDVRIIAATHRDLTAMVAEGRFREDLYYRLAQFPLQ
LPALRERDGDVLQLARHFTDQACLQLGRAPVEWSSAALDQLSSHSFPGNVRELKCLVERA
VLLCDDNLILPAHLSMPLAPAPTADDVTLRQRMERVERVFLLDCLHKNQGNRTRTARELG
VARRTLLYRLARLNIPVGKAREER
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgcaggcgctgaccggtacgtgtgcattcactgtcgatgcgctggccgcctgcttcacc
cgcctggggtttgaaagtgatgaacacgtgctgcctggaaaatgcgttgcggacgtcgcg
caactggcccggtgcgagctcagccagctgtatctgctcgatgaagcgagcgaccgatta
gagctggtcgcccaacattttcccgatgggcctgcaccggacttggcaagcacacccgtc
gacctgcgcaatcaacaactgctgcactacaccttgaaccggcgcgcggccctgagcctc
gatgaggtacaaggcagttgctatgacacccgcttcctgcctgtgtcgccgacaccgtgg
cgtgcgctgctgagcatgcctctgttcagcgcaacggatcgactgaccggcgtgttgttg
tgcgccagccaaagcccgctccagttgcacagctacgcaatctccctgggccaattgggt
agttttgccgtgagcaggctgctcctgctacgtggcatgcgccaaaggcttggagcgacg
ccgaggcaggctgtgccgttggccggggcatacggcttgatcggcaacagtgcagccatg
gcccagacgcgcgagttgatcagcaaagtcctgcataccccttacaccgtgttgctgcgc
ggcgagaccggcaccggcaaggaagtggtggcacaggcgattcacgcggccggcccgcgc
ggtgccaaggcttttgtcgtgcagaactgtgcggcatttgccgacgggttgctggagagt
gaactgttcggctatcgcaaaggcgcgtttaccggtgcagaccgcaatcatgccgggctg
tttgacgctgccgacggcggtacgttgctgctcgatgaaatcggtgacatgccgctgcta
ttgcaagccaagttgttgcgggttctgcaggaaggcgagattcgtccgctgggcgccagt
acggcgcacaaggtcgatgtgcgcatcatcgccgcgactcatcgcgacctgacggccatg
gtcgccgaggggcgctttcgcgaagacctgtattaccggcttgcgcagttccccctccaa
ttgcccgccctgcgtgagcgcgacggcgatgtgctgcaactggcccggcatttcaccgac
caggcctgcttgcagttgggcagggcgccggtcgagtggtcgagcgctgccctcgatcag
ctgtcgagccacagctttcccggcaatgtgcgtgagctcaaatgcctggtcgaacgcgcc
gtgctgctgtgtgacgacaatctgattctaccggcgcacctgtcaatgccactggcgccg
gcaccgaccgctgacgacgtaacgctacgccagcgtatggagcgggtagagcgggtattc
ctgctcgattgcctgcacaagaaccagggcaaccgcacccgtaccgcacgggagttgggg
gttgcgcgacgcacgctgctctaccggctggcgcgcttgaacattcccgttggcaaggcc
agggaagagcgttga

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