Pseudomonas khavaziana: QYQ93_22020
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Entry
QYQ93_22020 CDS
T10400
Symbol
rluC
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
pkv Pseudomonas khavaziana
Brite
KEGG Orthology (KO) [BR:
pkv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pkv03009
]
QYQ93_22020 (rluC)
Enzymes [BR:
pkv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
QYQ93_22020 (rluC)
Ribosome biogenesis [BR:
pkv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
QYQ93_22020 (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RluD_N
Motif
Other DBs
NCBI-ProteinID:
WWA75460
UniProt:
A0ABZ2DAW9
LinkDB
All DBs
Position
complement(4937004..4937963)
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AA seq
319 aa
AA seq
DB search
MTTTAPPTPSVQLLEVSPEYAGQRIDNFLLARLKGVPKTLIYRILRKGEVRVNKGRIKPE
YKLQAGDIVRVPPVRVPERDEPVPLAQGLLQRLEASIVFEDNKLIVINKPCGIAVHGGSG
LNFGVIEAFRQLRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLHTALRGDGVDKRYMA
LVRGNWASSIKSVRAPLQKSNLRSGERMVEVDEEGKEALTLFKVLRRFGDFATMVEAKPV
TGRTHQIRVHTLHAGHCIAGDTKYGDEGFSKEIRDLGGKRLFLHAYMLTVPLPDGGELKL
QAPVDEMWAKTVERLSVAP
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgacgactaccgcccccccgacccccagcgtccagctgcttgaggtctcgccggaatat
gccggccaacgcatcgacaattttctcctggcccggctcaaaggcgtgcccaagaccttg
atctaccgcattttgcgtaagggcgaagtgcgcgtgaacaagggtcggatcaagcctgag
tacaagttgcaggcgggcgatattgttcgtgtgccgcctgtgcgcgtgcctgagcgcgac
gagcctgtgccattggcccagggcctgttgcagcgcctggaggcctcgattgtcttcgaa
gacaacaagctgatcgtgatcaacaagccctgcggcattgcagttcatggcggcagtggt
ctgaatttcggcgtgatcgaagcctttcgccagttgcgcccggatgccaaggagctggaa
ctggtccatcgcctggaccgtgacacctccggcctgttgatgattgccaagaagcgcagc
atgttgcgccatctgcacactgccctgcgtggcgatggcgtggacaagcgctacatggcg
ttggtgcgtggtaactgggccagctcgatcaagagcgtgcgtgcgccgctgcagaaaagt
aacctgcgctccggcgagcgtatggtcgaggtggacgaggagggtaaggaagccctgacc
ctgttcaaggtgcttcgccgtttcggtgactttgccaccatggtcgaggccaagccggtc
actggccgcacccaccagattcgtgtgcataccctgcatgcgggccactgcattgctggc
gataccaagtacggcgacgaggggttctccaaggaaatccgcgacctgggcggtaagcgc
ctgttcctgcacgcctatatgcttacggtgccgctgcccgatggcggcgagctgaaattg
caggcgccggtcgatgagatgtgggccaagaccgtggagcgtttgagtgtcgcaccttga
DBGET
integrated database retrieval system
