Pseudomonas khavaziana: QYQ93_24500
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Entry
QYQ93_24500 CDS
T10400
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pkv Pseudomonas khavaziana
Pathway
pkv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QYQ93_24500 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkv03400
]
QYQ93_24500 (recD)
Enzymes [BR:
pkv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QYQ93_24500 (recD)
DNA repair and recombination proteins [BR:
pkv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QYQ93_24500 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
SH3_13
NAT10_TcmA_helicase
AAA_22
Viral_helicase1
UvrD-helicase
AAA_16
SLFN-g3_helicase
AAA_17
AAA_28
T2SSE
AAA_5
NTPase_1
NACHT
TraI_hel_assoc_N
AAA_25
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WWA75918
UniProt:
A0ABZ2DFR3
LinkDB
All DBs
Position
complement(5455997..5458066)
Genome browser
AA seq
689 aa
AA seq
DB search
MNLSPLLLEELAPLSRAADLLQLLERWVDRGWLRALDKAFVGFLHELDPQADPLVLLAAA
LTSHQLGHGHVCLDLFETLKAPDFALSLPPEGDQHTGVMLLPSQLLHGLDGAHWCHALAS
SQLVALAVDGNAAAQSRPLVLSGKRLYLRRYWAYERRIDSALRQRLASVESVADDLPQRL
NRLFDQPAPDGVIDWQKLACALATRGAFSIVTGGPGTGKTTTVVRLLALLQAPAVESGSP
LRIRLAAPTGKAAARLTESISQQVLSLTVADDVREKIPTQVTTVHRLLGSRPGTRHFRHH
LGNPLPLDVLVVDEASMIDLEMMANLLDALPAHARLILLGDKDQLASVEAGAVLGDLCRD
AEAGWYSPHTRQWLQAVSGEDLSTSGLQEDLDGSHPLAQQVVMLRYSRRFGEGSGIGQLA
RWVNQQNAEEARQLLAARRYDDLFCLSLKGEHDHALERLVLDGQGDGAQGYRYYLNLLQS
ARPSLDTRRDDPAWTHWAQQLLQAFDAFQLLCAVRKGPWGVEGLNLRITAALRKVRLIEG
DEQWYEGRPVLMTRNDYGLGLMNGDIGIALKLPESDGGPQVLRVAFPRNDGQGGVRFVLP
SRLNDVETVYAMTVHKSQGSEFTHTALILPDALNPVLTKELIYTGITRAKRWFSLIEPRS
GVFEEAVRRKVKRLSGLMLELDAVPEETD
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgtcgccgttactgctggaagagttggcgcccctgagtcgcgccgccgacctg
ctgcaactgctggagcgttgggtcgaccgtggctggctgcgcgccttggacaaagccttc
gtcggcttcctgcatgagcttgatccacaggccgatcctctggtgctgttggcggcggcc
ttgaccagccatcagttgggtcatggtcacgtctgcctggacctgttcgaaaccctcaag
gccccggacttcgccctgtcactgccgcccgagggcgaccagcacaccggcgtcatgctg
ctgccgtcgcagctgctgcatggcctggacggtgcccattggtgtcatgccctggcgtcc
agccaactggtcgcgctggcggtcgatggcaacgcagccgcccagagccgaccattggtg
ttgtccggcaaacgcctgtacctgcgccgctactgggcctacgaacggcgtatcgacagt
gccttgcgccagcgtcttgcgagcgtggagagcgttgccgacgatttgccgcaacgcctc
aatcgcctgttcgatcaaccggcgccggatggcgtgatcgactggcaaaaactcgcctgt
gccctggcgacccgcggcgcattcagtatcgtcaccggcggccccggcaccggcaagacc
accacggtggtgcgcctgctcgcgctgttgcaagcgcctgccgtggagtccggcagcccg
ttgcgtatccgcctggcagcgccgaccggtaaagccgccgcgcgcctgaccgaatccatc
agccagcaagtgttgtcgctgacagtggccgacgacgtgcgggaaaaaatccccactcag
gtcaccactgtccaccgtctgctgggcagccgcccgggaacccgtcatttccgtcatcac
ttgggtaacccgttacctctggatgtgctggtggtggatgaggcctcgatgatcgacctg
gaaatgatggccaacctgctcgacgccttgccggcccatgcacgcttgatactgttgggc
gacaaggaccaactggcatcggtggaagcaggtgccgtactcggcgacttgtgccgcgat
gccgaagccggctggtacagcccgcacacgcgccaatggttgcaagcggtcagcggcgaa
gacctcagtaccagtggcctgcaagaagacctcgacggcagccatcccctggcccagcaa
gtcgtgatgctgcgctattcgcgccgcttcggtgagggcagcggtatcggccaactggcg
cgttgggtcaaccagcaaaatgccgaagaggctcgccagctgttggctgcacgccgctat
gacgacctgttttgcctcagcctcaagggcgagcatgaccatgcacttgagcgcctggtg
ctggacggtcagggcgacggcgcccaaggttatcgctactacctgaacctgctgcaatcg
gcacgtccatcgctggatacgcggcgggacgaccctgcctggacccattgggcgcaacag
ttgctgcaagccttcgacgcgttccagctgctttgcgccgtacgcaagggcccttggggc
gtcgaagggctgaacctgcgcatcaccgcggcgctgcgcaaagtgcgcctgatcgaaggc
gatgagcagtggtacgaaggccgcccggtgctgatgacccgtaacgattacggccttggc
ctgatgaacggcgacattggcatcgcgctgaaattgcccgaaagcgacggtggtccccag
gtgctgcgcgtggccttcccgcgtaatgatggccagggcggcgtgcgctttgtgttgccc
agccggctcaatgacgtggaaaccgtgtacgcaatgaccgtgcacaaatcccaaggctct
gagttcacccataccgcactgatcttgccggatgcgctcaatccggtgctgaccaaagag
ttgatctataccggtattacccgcgccaagcgctggttcagcctgatcgagccgcgcagc
ggcgtgtttgaggaggccgtgcgccgcaaggtcaaacgcttgagcgggctgatgctggaa
ttggacgccgtgcctgaagaaactgactga
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