Pseudomonas khavaziana: QYQ93_24505
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Entry
QYQ93_24505 CDS
T10400
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pkv Pseudomonas khavaziana
Pathway
pkv03440
Homologous recombination
Brite
Enzymes [BR:
pkv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QYQ93_24505 (recB)
DNA repair and recombination proteins [BR:
pkv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QYQ93_24505 (recB)
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GFIT
Other DBs
NCBI-ProteinID:
WWA75919
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Position
complement(5458063..5461734)
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AA seq
1223 aa
AA seq
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MIGKPLALAFPLKGSQLIEASAGTGKTFTISALYLRLVLGHGGDESGFGRELLPPQILVV
TFTDAATKELRERIRIRLAEAARFFRDEIEQPDALVADLRDQYPPEQWPACANRLDIAAQ
WMDEAAVSTIHSWCQRMLREHAFDSGSLFTQTLETDHSDLLGEVLRDYWRLFCYPMHDDA
LNWVRSHWGGPAALMPRVRALFGSERPTDESREPAELINACLQERRAALVSLKAPWQQWA
VELRDICLQAVAAKAVDGRKMQARYFEPWFEKISAWAADEALEQLDIGTGFTRLTPDGMA
EAWKGEPPQHPGIEAMASLKASLDALPTPDAAVLQHAAGWVGKRFEEEKRRRAEMGFDDM
LIRLNAALQADGGERLASVIREQFPVALIDEFQDTDPVQYRIFDSIYRIEENHLDSGLFL
IGDPKQAIYAFRGADIYTYLRARQSTTGRHHTLGTNFRSSHAMVEAVNHVFQRAETGRGA
FLFREPNGENPVPFHPVLSQGRREQLQVDGQTLPAMNLWHLPTDQPISNALYRQQLAAAC
ATQIVALLNGGQQGTAGFVTKDGFSGVLPSNIAILVRDGKEAQAVRVELASRGVRSVYLS
DKDSVFAAQEARDLLTWLKACAEPDVERPLRAALACVTLNLSLAELERLNQDELAWEFRV
MQFRGYRSIWRTQGVLPMLRRLLHDFKLPQTLIARSDGERVLTNLLHLSELLQQAASELD
GEQALIRHLAEHLALSGQAGEEQILRLESDEQLVKVVTIHKSKGLEYDLVFLPFICSAKP
VDGSRLPLHYHDEQGKSQVSLRPTAELIAQADDERLAEDLRLFYVALTRAKHACWLGIAD
LKRGNNSSSVLHLSALGYLLGAGASLGESADLARWLLDLQQGCSAISYAPVPDAQDILFH
PPRNEATLLAPLLPKRKAAENWWIASYSALRIGDSMSAASLEAPESPQAQKLFDDERLDP
DAPREVVASGGDIHRFPRGPNPGTFLHGLLEWAGEEGFNVTPEAIEKAVGARCNRRNWEG
WIVTLSGWLGHLLQTPLPLCNDHVTLSGLKHYQIEMEFWFASHKVDVLALDKLVCQHTHG
GVSRVAAEPVLLNGMFKGFIDLTFEHDGRYYVADYKSNWLGPDDSAYTVDAMEHSILEHR
YDLQYVLYLLALHRQLKARLPDYDYDQHVGGALYLFLRGTQSVSQGAYFTRPPRELIEGL
DLLFQGKPIPPKVEPAWEQGVLL
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcaaacccttggccctggcattcccgctcaaaggcagccagttgatcgaggcc
agtgccggcactggcaagaccttcaccatctctgccttgtacctgcgcctggtgctcggc
cacggtggtgacgagtccggcttcggtcgcgaactgctgccgccgcaaatccttgtggtg
acgttcaccgacgccgccaccaaggaactgcgcgaacgtatccgcatccgcctggccgag
gccgcgcgtttttttcgcgacgaaatcgagcaacccgatgcgttggtcgccgacctgcgc
gatcagtaccccccggagcagtggcctgcctgcgccaaccgcctggacatcgccgcgcaa
tggatggatgaagccgccgtctcgactatccacagctggtgccagcgcatgctgcgcgaa
catgcgttcgacagcggcagcctgttcacccagaccctggaaaccgaccatagcgacctg
ctgggcgaagtgctgcgcgactactggcggctgttctgctacccgatgcacgacgacgcg
ctcaactgggtgcgcagccattggggcggccccgctgcactgatgccgcgagtgcgtgcg
ctgttcggcagcgaacggcccaccgatgaaagccgtgagccggcggagctgatcaacgcc
tgcctgcaagaacgtcgcgcagcgctggtaagcctcaaggcgccttggcagcaatgggcc
gtcgagctgcgggatatctgcctgcaagctgttgcggccaaagcggtcgatgggcgcaag
atgcaagcgcgctacttcgaaccctggttcgagaagatcagcgcctgggccgctgatgaa
gccctggaacaactggacatcggcaccggcttcacgcgcctgacgcccgacggcatggcc
gaagcctggaaaggtgagccgccgcagcacccagggatcgaggccatggccagcctcaaa
gccagcctcgacgccttgccaacaccagacgcagcggtgttgcaacatgctgccggctgg
gtcggcaaacgcttcgaagaagaaaagcgtcgccgcgcagagatgggcttcgacgacatg
ctgatccgcctcaatgcggcccttcaagccgacgggggcgagcgcctggccagtgtgatc
cgtgagcaatttccggtggcgctcattgatgaattccaagacaccgaccctgtgcaatac
cgcatcttcgacagcatctaccgcatcgaggaaaaccacctcgacagtggactgttcctg
atcggcgaccccaagcaggcgatctacgcctttcgcggcgccgacatctacacctacctg
cgcgcccggcagtccaccaccggccgtcatcacaccctgggcaccaatttccgttccagc
catgcgatggtcgaggcggtgaaccatgtgttccagcgggctgaaactggccgtggcgcg
ttcctgtttcgtgagcccaatggcgagaacccggtgccgttccacccggtactttcccaa
ggccgcagagagcaactgcaggtcgacggccagacgctgccggccatgaacctttggcac
ctgcccaccgaccagccgatttccaacgcgctttatcgtcaacaactggctgctgcctgt
gccacgcagatcgttgcgctgctcaacggcgggcagcaaggcacggcggggtttgtcacg
aaagacggtttcagcggtgtgctgccctcaaacatcgccatcctcgtgcgcgacggcaag
gaagcccaggccgtacgtgttgaactggccagccgtggcgtgcgcagtgtgtacctgtcg
gataaagactcggtattcgccgcccaggaagcccgcgacctgctgacctggctcaaggcg
tgcgccgagccggatgtcgagcgcccgctacgcgctgccctggcgtgcgtcaccttgaac
ctgtcgttggcggaactggagcgcctgaaccaggacgaattggcgtgggaattccgcgtc
atgcagttccggggttaccgctcgatctggcgtacccaaggcgtgttgccgatgctgcgt
cgcctgctccacgacttcaagttgccgcaaaccctcatcgcccgcagtgatggcgagcgt
gtgctgaccaacctgttgcacctcagtgagttgctgcaacaagccgcatcggaactcgat
ggcgaacaggcgttgatccgtcatctggccgaacacttggcgctgtcgggccaggctggc
gaagagcagatcctgcggctggaaagcgatgaacaactggtcaaggtggtgaccatccac
aaatccaaaggcctggaatacgacttggtgttcctgccgttcatctgctcggccaaaccg
gtggatggcagtcgcttgccgctgcattaccacgatgaacagggtaagtcccaagtgagc
ctgcggccgacggccgagctgattgcccaggccgatgatgagcgcctggccgaagacctg
cgtttgttctacgtggcgttgacccgcgccaaacacgcatgctggctgggcatcgccgac
ctcaagcgcggcaataacagcagttcggttttgcacctttcggccttgggctatctgctg
ggagccggtgcgtcgctaggcgaatccgccgatctggcgcgctggctgttggacttgcag
caaggctgctcggccatcagttatgcaccggtgccagatgcgcaagacatcctgttccac
ccgccacgcaatgaagcgaccctgctggcgccgttgctgcccaaacgcaaggctgcggaa
aactggtggatcgcgtcctacagcgccttgcgcattggcgacagcatgagcgccgccagc
ctcgaagcaccggaaagcccacaggcccagaagctgttcgacgacgaacgcctcgacccg
gatgcaccacgggaagtggtggcgtccggcggtgacattcaccgtttcccacgcggccct
aatccaggcacctttcttcacgggttattggagtgggccggtgaagagggtttcaacgtg
acgcctgaggcgatcgaaaaagccgtgggcgcacgctgtaatcgccgcaactgggagggc
tggatcgtcaccctcagcggctggctgggtcatctgctgcaaacaccgctgcccctgtgc
aacgaccacgtcaccctcagtggcctgaagcactaccagatcgaaatggagttctggttc
gccagccacaaggtcgatgtactcgccctcgacaagctggtgtgccagcacacacacggc
ggtgtgtcccgcgtggccgctgaaccggtgttgctcaacggtatgttcaagggttttatc
gacctgacgttcgagcacgatggccgctactatgtggcggactacaaatccaactggctc
ggtcccgacgattcagcctacaccgttgatgccatggagcattcgatcctcgagcatcgg
tacgacctgcaatacgtactttacctgctggccctgcatcgtcagctcaaggcacgcctg
ccggattacgattacgaccagcacgtcggcggcgctctgtacctgttccttcgcggtacc
cagtcggtgagccagggcgcgtatttcacccggcccccccgtgagctgatcgaggggctg
gacctgctgttccagggcaagcccatcccgcccaaggttgagcccgcctgggaacaagga
gtgctgctatga
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