Pseudomonas khavaziana: QYQ93_24510
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Entry
QYQ93_24510 CDS
T10400
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pkv Pseudomonas khavaziana
Pathway
pkv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QYQ93_24510 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkv03400
]
QYQ93_24510 (recC)
Enzymes [BR:
pkv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QYQ93_24510 (recC)
DNA repair and recombination proteins [BR:
pkv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QYQ93_24510 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
RIH_assoc
Motif
Other DBs
NCBI-ProteinID:
WWA75920
LinkDB
All DBs
Position
complement(5461731..5465183)
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AA seq
1150 aa
AA seq
DB search
MPDATSLSAGFMVVHGNRLDELRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DPEEDDMGGCGIAAAIDVQLPGSFMWQLYRMVLGRDEIPPKSLLDKAPLTWRLMRLLPEL
IDQPHFEPLQRFLTQDTDLRKRYQLAERLADLFDQYQVYRADWLEDWAAGRHQLRNGRGE
SKPLDPANCWQAELWRALLLDVGAEGMAQSRAGVHQRFIERINSLEQAPSGLPSRVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWSDIVADKDLLRNEYKRQARKAGMPVII
DPQTLHQHAHPLLAAWGKQGRDYISLLDSYDDPNSYRAAFRDGRIDLFSDSEPTTLLNQL
QDDILELRPLNETRELWPAVDLEHDASIRFHIAHSAQREVEILHDQLLQRFSADPTLRPR
DIIVMVPDVDSYAPHIRAVFGQLERNDPRFIPFTLTDQGQRGRDPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRERFAIKERDLPTLHRWIEGAGIRWGLNAEQRAGLGLPTELEQNS
WRFGLRRMLLGYAVGTGTACNGIEPYDEIGGLDAALIGPLVALLDALSDAHQALSQPASP
QAWGERLQRLMQLFFLPSSEHDDYLLGQLEQLRETWLETCESVGLQDELPLTVVREAWLA
GLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARDQLYISWVGRSIRDNSDRPASVLIGQLRDHLASGWQHAK
TDPPLIDAMTQEHPLQPFSARYFHEGGPLFSYAREWQLLHEAPVAVSPVNTLVQHQQEEP
LSLGQLQDFLRNPVKHFFSQRLKVFFEAAEVPLADEEPFVLDALQRYSLSDSLLSAALTQ
PDHLDQALNAQALRLQGSGLLPMVGFGECLRKELIEPLPDLVQRYQHLLALWPTPHTGAE
PISFEYQGIQLEGWISGLHRRGDGGLLSVTTIPNSIGSIKTRKWHRLIRPWVNHVVACAC
GLPLSTGLVASDDTLLLAPLDKPTAQEILGNLLLAWHTGMSTPLPVAVKTAFAWLGQTDP
AKAQAAASKAYEGDGITTDGERRETPALTRQFPDYAALVASEEFEGWCETLYRPLLNAPW
RSLSSMEASA
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgcaacgtccctcagcgctggattcatggtggtccacggcaatcgcctggac
gaactgcgtagcctggtggtcagttggatgcgccgctacccactggcgcctttggaaaac
gaaatcgccctggtacaaagcaacggtatcgcccagtggctcaagctggccctggccgaa
gatccggaggaagacgatatgggcggttgcggcattgctgctgcaatcgatgtgcagctg
cctggcagcttcatgtggcagctctaccgcatggtcttgggccgtgacgaaatcccgccg
aagtccctgctcgataaagccccgctgacttggcgcctcatgcgcctgttacccgagctg
attgaccagccgcacttcgagcctttgcaacgcttcctgactcaagacaccgacctgcgc
aaacgctatcaactcgccgagcgcctggctgacttgttcgaccaataccaggtctaccgc
gctgattggctggaagattgggccgcaggccgccaccaactacgcaatggtcgaggcgaa
tccaaaccgctcgaccctgccaattgctggcaagccgagttatggcgtgcgttgttgctg
gatgtgggagcagaaggcatggcccaaagtcgagccggcgttcaccaacgctttatcgaa
cgtatcaacagccttgaacaagcgccgtccggcttgccttcccgggtgattgtctttggc
atttcatcgctcccggcccaggcattggaagcgctggcgggtctggcccgtttcagccag
gtcctgctttgcgtacataacccttgccgccaccactggtccgacattgttgccgacaag
gacttgctgcgaaacgaatacaaacgccaggcgcgcaaagccggtatgccggtcatcatc
gacccccaaaccctgcaccagcacgcccatccgttgctcgccgcgtggggcaagcaaggc
cgtgattacatcagcctgctggacagctacgatgaccccaacagctaccgcgccgcattc
cgtgacggtcgcatcgacctgttcagcgacagtgaacccaccacgctgctcaaccagctc
caggacgatatcctcgaactgcgcccgctgaatgaaacccgtgagctgtggcctgctgtc
gacctggagcacgatgcttcgattcgcttccacatcgcccacagcgcccagcgcgaagtg
gagatcctccacgaccaattgctccaacgcttcagcgccgacccaactttgcgcccccgg
gacatcatcgtcatggtccccgacgtcgacagctatgcgccgcacattcgcgccgtcttc
ggccagctcgaacgaaatgacccacgcttcattcctttcacccttaccgaccaaggccag
cgcggccgcgaccctctgctgattgccgtcgagcacctgctgaaacttcccgacagccgt
ttccccgtcagcgagatcctcgacctgctcgacgtgcccgccctgcgcgaacgtttcgcc
atcaaagagcgcgacttgcccaccttgcatcgttggatcgaaggcgccggcatccgctgg
ggcctgaatgccgagcaacgcgccggtttaggcctacctacagaactggaacaaaacagc
tggcgattcggcttgcgccgtatgctgctgggctacgctgtcggcactggcacggcctgt
aatgggattgagccctacgacgaaatcggcggcctcgatgctgcactgatcggcccgctg
gtcgccttgctcgacgccttgagcgatgcccaccaggcgttatcccagcccgcctccccc
caagcctggggcgagcgactgcaacgcttgatgcagctgtttttcctccctagcagcgag
cacgatgactacctgttaggccagctcgaacaattaagagagacgtggctggaaacttgc
gagtccgttggcttgcaggacgagttaccgcttaccgtggtgcgtgaggcgtggttggcc
ggactggatcaagggcgcctgtcccagcgcttcctcgcgggagctgtcaatttttgtacc
ctcatgcccatgcgtgcaatcccgttcaagctggtctgcctgctcggcatgaatgatggc
gattacccgcgggcccagccgcccctggacttcgacctgatgggcagcgactaccgcccc
ggtgaccgttcgcgccgcgaagacgaccgctacttactgcttgaagcgctgctgtcggcc
cgcgaccagctatatatcagctgggtagggcgcagcatccgcgataacagcgatcgccca
gcctcggtgttgattggccaactgcgcgatcacctcgccagcggctggcagcacgccaaa
accgatccaccgctgatagacgcaatgacccaggagcatcctctgcagccctttagtgcc
cgctacttccatgaaggcggtccgctgttcagctacgcccgcgaatggcagttactgcat
gaagccccggtcgccgtgagcccagtaaatacgctggtgcaacaccagcaggaagaaccc
ctgagcctcggccagttacaggacttcctacgtaatccggttaaacacttcttcagccag
cgactgaaagtgttcttcgaagccgccgaagtgcccctggccgacgaagaaccctttgtg
ttggacgcactgcaacgctacagcctcagcgacagtctgttgagcgccgcactgacccag
cctgatcacctcgaccaggccctcaatgcccaggcgctgcgcctgcaaggcagcggactg
ctgccgatggtcggtttcggtgagtgcctgcgtaaggagctgatcgagccgttgcctgat
ctggtgcaacgctatcaacaccttctggccctatggccaaccccgcataccggcgctgaa
ccgatcagtttcgagtatcagggcatccagctcgaaggctggatcagcggcctgcatcga
cgcggtgatggtggcttattgagcgtcaccaccatccccaacagcattggctcgatcaag
acccgcaagtggcatcgcctgatccgaccctgggtcaatcatgtggtggcctgcgcctgc
ggcctgccattgagcaccggcctggtggcaagtgacgacactttgctgctggctccgctg
gataagcccactgcgcaggaaatccttggcaacctgctgctggcctggcataccggcatg
agcacgccgctgcccgtcgcggtgaaaaccgcctttgcctggctcggccagaccgatcct
gccaaggctcaagccgcagccagcaaggcctatgaaggcgacggcatcaccactgacggt
gaacgccgcgagacgcccgcgctcacgcggcaatttcccgactacgccgccttggttgcc
agtgaagagttcgaaggctggtgcgaaaccctgtatcgcccactgctcaacgccccgtgg
cggtcactctccagcatggaggccagcgcatga
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