Pseudomonas khavaziana: QYQ93_24715
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Entry
QYQ93_24715 CDS
T10400
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pkv Pseudomonas khavaziana
Brite
KEGG Orthology (KO) [BR:
pkv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pkv03016
]
QYQ93_24715 (truB)
Enzymes [BR:
pkv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QYQ93_24715 (truB)
Transfer RNA biogenesis [BR:
pkv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QYQ93_24715 (truB)
Prokaryotic type
QYQ93_24715 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
WWA75956
UniProt:
A0ABZ2DIV9
LinkDB
All DBs
Position
complement(5512559..5513476)
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPIGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLMQLGKTTTTADAEGDVLQVREVTVGRADIEAALPAFRGEIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLACEGDTARLAVDCSKGTYI
RTLVEDIGEKLGCGAYVAELRRTQAGPFSLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLHFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgcaatgtcagcggcatcattctgctcgacaagccc
attggctttacctccaatgccgcactgcagaaggtccgctggttgctcaatgccgagaag
gcagggcacaccggcagccttgatccactggccaccggcgtgttgccgttgtgctttggc
gaggccaccaagttctcgcaatacctgctcgattccgacaagggttatgaaaccctgatg
caattgggcaagaccaccaccacggccgacgccgaaggtgatgttctgcaggttcgcgag
gtgaccgttggtcgtgctgatatcgaagctgctttaccggcttttcgcggggaaatcagt
cagataccgccgatgtactcggcgctcaagcgcgacggacaaccactttacaagctggca
cgtgcgggcgaagtagtggagcgcgaaccgcgttctgttactattgcgcgcttggaattg
ctcgcctgtgaaggcgacactgcccgcctggccgtggactgcagcaagggcacctatatc
cgtaccctggtggaagatattggtgaaaagctcggctgcggtgcgtacgttgcagaactg
cgacgcacccaggccggccctttcagcctggcccagacggtgacgctggaagagttggaa
gccgtgcatgccgaaggcggcaacgaagcagttgatcgcttcctgatgccatcggatagc
ggtttgctcgattggccattgctgcacttctcggagcacagcgcgttctactggctcaac
ggccagccggtacgcgccccggatgccccgaagttcggcatggtgcgggtacaggatcat
aacggtcgctttatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccacgtcga
ctgattcggtcagaatga
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