Pseudomonas khavaziana: QYQ93_25380
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Entry
QYQ93_25380 CDS
T10400
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pkv Pseudomonas khavaziana
Pathway
pkv03030
DNA replication
pkv03430
Mismatch repair
pkv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QYQ93_25380
03430 Mismatch repair
QYQ93_25380
03440 Homologous recombination
QYQ93_25380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkv03032
]
QYQ93_25380
03400 DNA repair and recombination proteins [BR:
pkv03400
]
QYQ93_25380
Enzymes [BR:
pkv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QYQ93_25380
DNA replication proteins [BR:
pkv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QYQ93_25380
DNA repair and recombination proteins [BR:
pkv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QYQ93_25380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WWA76082
UniProt:
A0ABZ2DCP7
LinkDB
All DBs
Position
complement(5656907..5657518)
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AA seq
203 aa
AA seq
DB search
MERIAVIDFETTGITPSSHCRATEIGVVILERGQIVDRYQSLMNAGVRVPAFIEQLTGIS
NAMLRSAPPAERVMNEVNEFVGTTPLMAHNAAFDQKFWDFELGLIRRTRLQKFACSLLLA
RRLMPAAPNHKLGTLNAYAKLPHTGQAHRALADAEMAANLTAHLAQQLRQTHGLRELSHD
LLCTLQKVPAAKINEHLKKHRGF
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgtatagcggtcatcgactttgaaaccaccggcatcacccccagcagccactgc
cgggctacggagattggcgtcgtcatcctcgagcgcggacaaatcgtggaccgctaccag
agcctgatgaacgccggcgtgcgcgtaccggcttttatcgaacaacttaccggcatcagc
aacgccatgctgcgcagcgcgccaccggctgagcgggtgatgaacgaagtcaatgaattc
gtcggcaccacgcccttgatggcgcacaacgccgccttcgaccagaagttctgggacttt
gaactgggcctgatccgccgcacccgcctgcagaaattcgcctgctccctgctgctggcc
cgccgcctgatgccggctgcgcccaaccacaaactcggcaccctcaacgcctacgccaaa
ctgccccacaccggccaggctcaccgggcgctggcggatgcggaaatggccgccaacctc
acggcgcacctggcccagcaactgcgccagacccacggcctgcgcgaactgtcccatgac
ctgttgtgcaccttgcagaaagtgcctgccgcgaagatcaatgaacacctgaagaaacat
cgcgggttctga
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