Pseudomonas khavaziana: QYQ93_26910
Help
Entry
QYQ93_26910 CDS
T10400
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pkv Pseudomonas khavaziana
Pathway
pkv00260
Glycine, serine and threonine metabolism
pkv00460
Cyanoamino acid metabolism
pkv00630
Glyoxylate and dicarboxylate metabolism
pkv00670
One carbon pool by folate
pkv00680
Methane metabolism
pkv01100
Metabolic pathways
pkv01110
Biosynthesis of secondary metabolites
pkv01120
Microbial metabolism in diverse environments
pkv01200
Carbon metabolism
pkv01230
Biosynthesis of amino acids
pkv01240
Biosynthesis of cofactors
pkv04981
Folate transport and metabolism
Module
pkv_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pkv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
QYQ93_26910 (glyA)
09102 Energy metabolism
00680 Methane metabolism
QYQ93_26910 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
QYQ93_26910 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
QYQ93_26910 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
QYQ93_26910 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
QYQ93_26910 (glyA)
Enzymes [BR:
pkv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
QYQ93_26910 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
WWA76366
UniProt:
A0ABZ2DGA6
LinkDB
All DBs
Position
complement(6014106..6015359)
Genome browser
AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMEAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALINAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGINTDTGLIDYDEVERLAVEHKPKMVVAGFSAYSK
TLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKANEAIEKKLNAAVFPGAQGGPLMHVIAGKAVCFKEALEPGFKAYQQQVIDNAQAMAE
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKEADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVPQCVELAGWICDILDNLGDADVEANVAKHVSALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaaacaagaccagatccagggatatgacgacgcactgctggcggcgatgaat
gccgaggagcagcgccaggaagatcatatcgagctgatcgcgtcggagaactacaccagc
aagcgcgtgatggaagctcaaggcagcggcctcaccaacaaatacgccgaaggctatccg
ggcaagcgctactacggtggctgcgagcatgtggataaggtcgaagccctggccatcgaa
cgcgccaagcagctgttcggcgccgattacgccaacgtgcagccgcactccggttcctcc
gccaacagcgcggtgtaccttgcgttgatcaacgccggcgacaccatcctgggcatgagc
ctggcccacggcggccacctgacccacggcgccaaagtgtcgtcctcgggcaagctgtac
aacgcggtgcaatacggcatcaacaccgacactggcttgatcgactacgatgaagtcgag
cgtctggcggtggagcataagccgaagatggtcgtggcaggtttttctgcctactccaag
accctggatttcccacgctttcgtcagatcgccgacaaagtaggcgcgctgctgttcgtc
gacatggctcacgtcgccggcctggttgccgctggcctgtacccgaacccgctgccttac
gccgacgtggtcacaaccaccacccacaagaccttgcgcggtccacggggcggcttgatc
ctggccaaggccaacgaagccattgaaaagaaactcaacgccgcggtgttccctggcgcc
cagggtggcccgctgatgcacgtgatcgccggcaaggccgtgtgtttcaaggaagcgctg
gagcctggcttcaaggcttaccagcagcaagtgatcgataacgcccaggccatggccgaa
gtgttcatcaagcgtggctacgatgtggtctccggcggcaccgacaaccacctgttcctg
gtcagcctgatccgccagggcctcaccggcaaagaggcagatgccgccctcggccgcgcc
cacatcactgtcaacaagaacgccgtgccgaatgacccgcagtcgccgttcgtgacctcg
ggcctgcgtatcggtaccccagcggtaaccacgcgcggtttcaaagtgccgcagtgcgtc
gagctggctggctggatctgcgacatcctcgacaacctcggcgacgccgatgtcgaggcc
aacgtggccaagcacgtgtctgccctgtgcgctgatttcccggtttatcgctga
DBGET
integrated database retrieval system