Pseudomonas khavaziana: QYQ93_28370
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Entry
QYQ93_28370 CDS
T10400
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pkv Pseudomonas khavaziana
Pathway
pkv00300
Lysine biosynthesis
pkv00470
D-Amino acid metabolism
pkv01100
Metabolic pathways
pkv01110
Biosynthesis of secondary metabolites
pkv01120
Microbial metabolism in diverse environments
pkv01230
Biosynthesis of amino acids
Module
pkv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pkv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QYQ93_28370 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QYQ93_28370 (lysA)
Enzymes [BR:
pkv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
QYQ93_28370 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WWA76638
UniProt:
A0ABZ2DHU9
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Position
6322429..6323676
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AA seq
415 aa
AA seq
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MDAFNYRDGELCAEGVALSAIAQQFGTPTYVYSRAHIEAQYRSFTDALDGVPHLVCYAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGQADKIVFSGVGKSRDDMRRALEVGVH
CFNVESTDELERLQLVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLEVLGVDCHIGSQLTTLPPFLDALDRLLALIDRLGECGIYLHHIDLGGGV
GVRYRDEEPPAIADYIQAVRKRIEGRDLTLMFEPGRYIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMNVTAVTPRASVARAYDIVGPICETGDFLAKDRQLALEEGD
LLAVHSAGAYGFVMSSNYNTRGRTAEVLVDGDQAFEVRRRETVAQLYAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttaactaccgggacggcgagctgtgcgcggagggcgtggcgttgtccgcg
attgcccagcagtttggcaccccgacctatgtgtactcccgtgcgcatatcgaagcccaa
taccgctcgttcaccgacgcgctcgacggcgtaccgcacctggtgtgctacgcggtcaag
gccaactccaacctgggcgtactgaatgtcctggcgcgcctgggcgccggtttcgacatc
gtctcccgtggcgagctggaacgcgtactggccgccggcggccaggctgacaagatcgtg
ttctccggggtcggcaagagccgcgatgacatgcgccgcgccctggaagtcggcgtacat
tgcttcaacgtcgagtccaccgacgaactggagcgcctgcagcttgttgccgctgaaatg
ggcgtacgcgcgccgatctccctgcgcgtcaacccggatgtcgacgcaggcacccacccg
tacatttccaccggtctcaaagagaacaagttcggcatcgccatcgccgacgccgaagac
gtgtacatccgcgccgcccaactgccgaacctggaagtgctgggcgtcgactgccatatc
ggttcgcaactgaccaccctgccacccttcctggatgcgctcgaccgcctgctggcgctg
atcgaccgcctgggcgagtgcggcatctacctgcaccacatcgaccttggcggtggcgtg
ggcgtgcgttatcgcgatgaagaaccaccggcgatcgccgactatatccaggccgtgcgc
aaacgcattgaaggccgcgacctgaccctgatgttcgagccgggccgttatatcgtcgcc
aacgctggtgtactgctgacccaggtcgagtacctcaagcacaccgaacacaaggatttc
gctatcgtcgatgcggcgatgaacgacctgatccgcccggcgctgtaccaggcctggatg
aatgtcaccgccgtgacgcctcgcgcaagcgttgcccgcgcctatgacatcgtcggcccg
atctgcgagaccggcgacttcctggccaaggatcgtcagttggccctggaagaaggtgac
ctgctggccgtgcattcggccggtgcctacgggtttgtcatgagttccaactacaacacc
cgcgggcgtaccgccgaggtgctggtggacggtgatcaagcatttgaagtgcgtcgccgc
gagacggtagcccagttgtatgctggcgaaagcctgctgccggagtaa
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