Planococcus koreensis: ACM1PH_11105
Help
Entry
ACM1PH_11105 CDS
T11311
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
Organism
pkw Planococcus koreensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
TRCF
DEAD
Helicase_C
CarD_TRCF_RID
ResIII
Cas3-like_C_2
MFD_D3
RecG_dom3_C
UB2H
PD40
SecA_DEAD
IstB_IS21
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
XOO54772
LinkDB
All DBs
Position
2122669..2126202
Genome browser
AA seq
1177 aa
AA seq
DB search
MDPILQVFSEDSHTQKFIADLQNGQDHQLISGLSGSARPVFYQTVWAKTQAPLLIVTPNL
LHAQRVYDDLTKLMGEDMVHLYPADELIAADVSFSGPELRAHRIDTLDHMASNGQGIYIT
PVAGMRKLMPSHAQWADSTLRVNEGEELDTGQWMLKLVAMGYSRTPMVTTPGEFALRGGI
LDIYPLNFEHPVRIELFDTEVDSIRLFSAEDQRSLKKVKSLCILPASELVLSKPQRLQLA
DKIEAQLAKSLKSIKAEDTKEALLLHIQHDIDMLREGNVPDQVAKYAALVETQSSFLADY
FPADGFIFFDELGRIQEMTETLEREEGDWIVSLLEEGKFLHDLRLSYTFREVLQKTKQKV
TFLSLFVRTFPSVQVKKSIAFSCKPMQSFHGQMNLLKAEMERWQLAKFQAFVIAEGNERL
EKVRSVLEDYGMEAEIFNPQTEVQGGHIYLVDGDLSSGFEMPLQRIAVITDAEMFKQQAK
KKSRPQKLTNAERIKSYSEIKPGDYIVHVHHGIGRYVGIETLEIGGIHKDYLHIIYKADD
KLFVPVDQIDLIQKYIASEEKEPKLHKMGGAEWQKTRRKVSAAVQDIADDLIKLYAEREA
QKGYAFSKEQDMQRQFEAEFPYEETVDQERSINEVKRDMENERPMDRLVCGDVGYGKTEV
AIRAAFKAVLDGKQVAFLVPTTILAQQHFETMAERFKDYPITVGLMSRFRSKKQQTETAK
GLKNGTVDVVVGTHRILSKDIAYKDLGLLIVDEEQRFGVTHKEKIKQMKTNVDVLTLTAT
PIPRTLHMSMIGVRDLSVIETPPANRFPVQSYVMEHNGALVREAIEREMARGGQVFYLYN
RVDDMTRKVEEIQALVPEARVGYAHGQMSESELESTILSFLDGEYDVLVTTTIIETGIDI
PNVNTLIVYNADRMGLSQLYQLRGRVGRSNRVAYAYFMYQRDKVLTDVAEKRLMAIKEFT
ELGSGFKIAMRDLSIRGAGNLLGSQQHGFIDSVGFDLYSQMLEQAIEERRTGNKKEVVPE
IEISLDIDAYIPDSYIGDGYQKIQMYKRVKGITDVEEVSELQDELIDRFGDMPIETDRLL
RIARMKVWARMAGVESIKRSGSVTAVKLSERGTTSVNGGKLVEQSAAFGRAVGFRMAGQQ
LVMSIDDTKTGKTHPFDVLEGMIKLLPESLKEEKPVG
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggatccaatattgcaggtgttttcagaggattctcatacacagaaattcattgcggat
ttacagaatggccaagaccatcagcttatttccggactttccggcagcgcacgcccggta
ttttaccaaacagtctgggcgaaaacacaagcgccgctgctgatcgttactccgaacttg
ctgcatgcgcagcgcgtctatgacgatttgacgaaattgatgggcgaagacatggtgcat
ctttatccggcagatgaactgattgcagcagatgtatcattttcaggtccggaattgcgc
gcccaccgcattgatacgcttgaccacatggcgagcaacggccaaggcatttacatcacc
ccggtagcgggcatgcgcaaattgatgccgtcccatgcacaatgggcggattccacattg
cgcgtcaatgagggcgaagagcttgataccgggcagtggatgcttaaactggtggcgatg
ggctactcgcgcacgccgatggtgacgacacctggagagtttgcgctgcgcggcggaatc
ctcgatatctatccgttgaatttcgaacaccctgtacgcattgaattgttcgacacggaa
gtcgattcgattcgcttgttctcagctgaagaccagcgttcgctcaaaaaggtcaagtcg
ctgtgcatcctgccggcttctgaactggtcttatcgaagccacagcgtttgcagcttgcc
gacaagattgaagcgcagctcgcgaaatcgctgaaatcaatcaaagccgaagatacgaaa
gaagcgttgctgctgcatatccagcatgatatcgacatgctgcgggaaggcaatgtgccc
gatcaggtagcgaaatatgcggcattggtggaaacgcaatcttcctttttggcggattat
ttccccgcagacggctttatcttttttgatgagctcgggcgcatccaggaaatgaccgaa
acgctggaacgtgaagaaggggactggattgtgtcgctgctggaagaagggaaattcctg
catgacctgcggctgtcttacacgttccgggaagtgttgcaaaaaaccaagcaaaaagtg
acgttcctgtcgctgtttgtccggacatttccatccgttcaagtcaaaaagtcgatcgcc
ttttcgtgcaaaccgatgcagtcattccatggccagatgaatttattgaaagcggaaatg
gaacgctggcagctcgcgaaattccaggccttcgtcattgcagaaggcaatgaacgcttg
gaaaaagtacggtcggtgctcgaagattacggcatggaggcggaaatattcaatccgcag
acagaagtgcaaggcggccatatctatttggtcgatggtgatttatcgtctggttttgaa
atgccgctgcagcggattgcggtcattacagacgcagagatgttcaagcagcaggcgaag
aaaaaaagccgcccgcaaaagctgacgaatgccgagcgcattaaaagctattcggaaata
aaacccggagattatattgtccatgtccatcacggcatcggacgctatgtcggcatcgag
acgctggaaatcggcggcatccacaaagattacctgcacatcatttacaaagccgatgat
aaattattcgttcccgtcgaccaaatcgacctgatccagaaatacatcgcttcggaagaa
aaagagccgaagctccataagatgggcggggcggaatggcagaagacgcgcaggaaagta
tcggctgccgtccaggacatagcggacgacctcatcaaattgtacgcagaacgcgaagcc
cagaaaggctatgcattttccaaagagcaggacatgcagcgccaattcgaggcggaattc
ccttatgaggaaaccgtcgaccaggagcgttcgatcaatgaagtgaagcgcgacatggaa
aacgagcggccgatggaccgccttgtatgcggcgatgtcggctatggcaagaccgaagtg
gccatccgcgcggcgttcaaagccgtgctggacggcaaacaggtggcattcctcgtgccg
acgacgattttggcgcagcagcatttcgaaacgatggctgaacgcttcaaggattatccg
atcaccgtcggcctcatgagccgcttccgttcgaaaaagcagcagactgagacagcgaaa
ggcttgaagaacggcacggtcgatgtcgtagtcggcacgcaccgaattttgtcgaaagac
atcgcctataaagatttagggctgttgatcgttgatgaagagcagcgctttggcgttacg
cataaagaaaagattaaacaaatgaaaaccaatgtcgacgtcttgacgctgacggctaca
ccgattccacgtacgcttcacatgtcgatgatcggcgtccgtgatttatcggtcattgaa
acgccgccggccaaccgtttccctgtgcagagttatgtcatggagcataacggcgcattg
gtgcgcgaagccattgaacgcgaaatggcgcgcggcgggcaagtgttctatctgtacaac
cgtgttgacgacatgacccgcaaggtggaagaaatccaggcgctcgtgccggaagcgcgt
gttggttatgcccacgggcaaatgtcggaatcggaattggaatcgacgattctcagtttc
ctggacggcgaatacgacgtcttggtgacgacaacgatcatcgagacgggcatcgacatt
ccgaacgtcaatacgctcatcgtctacaacgccgaccgtatgggcttgtcgcaattgtat
caattgcgtggccgcgtcggccggtcgaaccgtgtcgcgtatgcgtatttcatgtaccag
cgcgataaagtgctgacggatgtcgctgaaaaaaggctgatggcgatcaaggagtttacc
gaactcggctccggctttaaaatcgccatgcgcgatttgtcgatccgcggagcgggcaat
ctgctcggttcacagcagcacggctttatcgattcggtcggctttgatttgtattcacaa
atgcttgagcaggcgattgaagagcgccgcacgggcaataagaaggaagtggtgccggaa
atcgagatttcgctcgatatcgatgcttatattccggacagctatatcggcgacggctac
cagaaaatccagatgtacaagcgcgtcaaaggcattaccgatgtcgaggaagtgtcagag
ctgcaggatgagctcatcgaccgcttcggcgatatgccgattgaaacggaccgcctgctg
cgcattgcccgcatgaaagtatgggcgcgtatggcaggagtcgaatcgatcaagcgcagc
ggctcggttacggcggtcaaactgagcgaacgcggtacgacttcggtcaacggcggcaaa
ttggtggaacaatccgctgcattcggccgcgctgtcggtttccggatggccggccagcaa
ttggtgatgtcgatcgatgacacaaaaaccggtaaaacacacccattcgacgttcttgaa
ggcatgatcaagctgcttccggaatcattgaaggaagaaaaaccggtcggctga
DBGET
integrated database retrieval system
