Psychrobacter sp. KH172YL61: PKHYL_00100
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Entry
PKHYL_00100 CDS
T08351
Symbol
rlmF
Name
(GenBank) ribosomal RNA large subunit methyltransferase F
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
pky
Psychrobacter sp. KH172YL61
Brite
KEGG Orthology (KO) [BR:
pky00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pky03009
]
PKHYL_00100 (rlmF)
Enzymes [BR:
pky01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
PKHYL_00100 (rlmF)
Ribosome biogenesis [BR:
pky03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PKHYL_00100 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
Methyltransf_12
Eco57I
Motif
Other DBs
NCBI-ProteinID:
BBI65819
LinkDB
All DBs
Position
complement(7728..8681)
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AA seq
317 aa
AA seq
DB search
MHPRNPHQGRYDFAVLTRALPELAEHTITNPKGEPTINFSDHQAVRTLNKALLAHYYCVK
FWDIPDGYLCPPIPGRADYIHYIADLLAQTTHVNADNTPPIGKEIHALDIGTGASAIYPI
VGSQSYGWRFTASDIDPVSVNTAALICDANPKLKSAVKVKLQPEPKFIFKNIIGRQDYFD
VVVCNPPFHASLEEAMEANSRKQHNLQRHRGKNESEQISRHSTKSGNAAQNLNFGGQHKE
LWSEGGEIAFLTKMANESQSFAEHVGWFTTLVSKSENVKPLQLLLKQLNVAQMRIIEMSQ
GQKSTRVLAWRFDTDEE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
ttgcatccgcgcaatccacatcaaggtcgttacgactttgccgtattgactcgcgcgttg
cctgagcttgctgagcataccatcaccaaccccaaaggcgagccgacgattaatttctcg
gatcatcaggcggttcgtactctcaacaaagcactactggcgcactattactgcgtgaag
ttttgggatattcctgacggctatctgtgtccgccaatccctgggcgtgccgattatatt
cactatattgcggatttactcgcgcagaccacgcacgtgaatgccgacaacacaccgccg
atcggtaaagagattcacgcccttgatatcggtacgggtgccagtgcgatctatccgatt
gtcggtagccaaagctacggctggcgctttaccgcaagcgatattgatccggtttcggtc
aatactgccgccctcatttgtgacgccaatcctaagctaaaaagcgcggtcaaagtaaag
ctacagcctgagcctaagttcatctttaaaaacatcattggtcgtcaagattatttcgat
gtggtggtgtgtaaccctccgtttcacgcctcattagaagaagcgatggaagccaacagt
cgtaagcagcacaacctacaacgtcatcgcggcaaaaatgaaagcgagcaaatcagccgt
cattcaaccaagtcaggtaacgcggcgcaaaacctaaacttcggtggtcagcataaagaa
ttgtggagtgaaggtggcgagattgcatttttgaccaagatggcaaacgaaagccaaagc
tttgcagagcatgtcggctggttcacgacgttagtatcaaaatctgaaaacgtgaaacct
ttacaactactattaaagcagcttaatgtcgcgcagatgcgtatcattgagatgagccaa
ggtcaaaagagcactcgtgtactcgcgtggcgctttgataccgacgaagaatag
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