Psychrobacter sp. KH172YL61: PKHYL_03690
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Entry
PKHYL_03690 CDS
T08351
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pky
Psychrobacter sp. KH172YL61
Brite
KEGG Orthology (KO) [BR:
pky00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pky03021
]
PKHYL_03690 (rpoH)
Transcription machinery [BR:
pky03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PKHYL_03690 (rpoH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
DUF7645
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
BBI66178
UniProt:
A0A7U6KL57
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All DBs
Position
complement(307000..308025)
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AA seq
341 aa
AA seq
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MATTTSDAANANKKDSTAPIKNDARDAALKAAAQRPPYDASTLGNTSTRDLVPAMPTHLA
APGVNLGAYINTVHQIPILTPVQEQELAHRYYDEGDVEAARLLVMSHLRFVIHIARSYSG
YGLPQADLIQEGNLGLMKAVKRFDPNKGVRLVSFAVHWIKAEIHEFVIRNWRIVKVATTK
AHRKLFFNLRSLKKTNNQLTLEEADAIAKDLNVTRKQVLEMESRLTSYDASFEAQSSDDD
DGRYAPQLFLEDGIDPAEQLEEEDWEENNSSALIAAMGTLDDRSRDIVEQRWLSEQKSTL
HELAAVYSISAERVRQIEKNAMDKIRDAMTIDSVILPDDIQ
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggctactactacttctgatgctgcgaatgcgaataaaaaagacagcacagctcctata
aaaaacgatgcgcgcgatgctgcactaaaggcagctgcacagcgcccaccttatgacgcc
agtacgttaggcaataccagtacgcgcgatttggtgccagcaatgccaacccatttggca
gcgccgggggttaatctgggcgcctacatcaatactgtgcatcaaattccgatcttaacg
cctgtacaagagcaagaacttgcccatcgctattatgatgaaggtgatgtcgaagcagca
cgtctgctggtgatgtcgcatctgcgttttgtcattcatattgcacgtagctactcaggt
tatggactgccacaagctgatttaatccaagaaggtaatcttggattgatgaaggcggtc
aaacggtttgatccgaataaaggcgtgcgtttagtgtcttttgccgtacattggatcaaa
gctgaaattcacgaatttgtcatccgtaactggcgtatcgtaaaagttgcgaccaccaaa
gcacatcgcaagttattctttaatttacgtagtttaaagaaaaccaataatcagctcacg
ctagaagaagcagacgcgattgccaaagacttgaatgttacgcgcaagcaagtgctcgag
atggagtcacgcctgacttcttatgatgcctcgtttgaagcgcaatccagcgacgatgat
gacggtcgctatgcaccgcagctgtttttggaagatggcatcgatcctgctgagcagttg
gaagaagaagactgggaagaaaataactcgtctgccctcatcgcggctatgggaacattg
gacgatcgctcacgtgatatcgtcgagcagcgctggctctctgagcaaaaatccactttg
cacgagctggccgcggtttactctatatccgctgaacgtgtccgtcagatcgaaaaaaac
gcgatggacaaaattcgcgatgccatgaccattgatagcgtgatcttacctgatgatatt
caatag
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