Psychrobacter sp. KH172YL61: PKHYL_06010
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Entry
PKHYL_06010 CDS
T08351
Symbol
rnc
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pky
Psychrobacter sp. KH172YL61
Pathway
pky03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pky00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PKHYL_06010 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pky03019
]
PKHYL_06010 (rnc)
03009 Ribosome biogenesis [BR:
pky03009
]
PKHYL_06010 (rnc)
03036 Chromosome and associated proteins [BR:
pky03036
]
PKHYL_06010 (rnc)
Enzymes [BR:
pky01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PKHYL_06010 (rnc)
Messenger RNA biogenesis [BR:
pky03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PKHYL_06010 (rnc)
Ribosome biogenesis [BR:
pky03009
]
Eukaryotic type
90S particles
RNase
PKHYL_06010 (rnc)
Prokaryotic type
rRNA processing factors
PKHYL_06010 (rnc)
Chromosome and associated proteins [BR:
pky03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PKHYL_06010 (rnc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
BBI66410
LinkDB
All DBs
Position
496821..497618
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AA seq
265 aa
AA seq
DB search
MKPTSQHSQAVLTSKKNSTSVDTLVVSSEFTQRLAVLTRKLGYVFNDLSLPKLALTHRSF
DSKKNYERLEFLGDALLGMIVGEALYHRYPNQNEGRLTRMRATLVRQESLVIIAQNLELS
NHLILGVGERKGGGRNRASILADAVESLIGAIYLDSQDMEITRHCVLSWYGDLIDNVNDQ
KALKDAKSRLQEWLQSKQFDLPSYELMETRGNAPHQIFVVRCHVNIQNCSDITESGESRR
IAEQKAAELMINQLHKLPGSAKKRS
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaacttcgcaacattcccaagcggttcttacttccaaaaaaaatagcacgtct
gtcgacacgcttgttgttagctcagaatttactcagcgcttagcagtcttaacgcgcaag
ttaggctatgtatttaatgatttgagcctgccaaagcttgcattgacgcaccgctcattt
gacagcaaaaaaaactatgagcgtctagagtttttgggtgatgcgcttttgggcatgatt
gtgggtgaggctttataccatcgttatcctaatcaaaacgaagggcgtctaacccgtatg
cgtgcaactttggtccgccaagaatcattggttattatcgcgcaaaatctagagctgtct
aaccatctgatattaggcgtgggtgagcgtaagggtggcggccgtaatcgtgcttctata
ttggcggatgcggtagagtctttgattggagccatctatttagacagtcaagatatggag
attactcgtcattgcgtactctcttggtatggagacttgattgacaacgtcaatgaccaa
aaagcactaaaagatgcgaagagccgtttgcaagagtggttacagtctaagcaatttgat
ttgccaagctacgagcttatggaaacacgtggcaacgctccccatcaaattttcgtagta
cgctgtcacgtgaatattcaaaactgctctgatattactgaatctggtgaaagtcgccgc
atcgctgagcaaaaagcagcagaacttatgattaatcagctgcacaaacttccaggatcc
gctaaaaaacgctcttag
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